RNA–Protein interactions for RNA: ENST00000412453.2

HMGA1P5-201, Transcript of high mobility group AT-hook 1 pseudogene 5, humanhuman

BASIC

Gene HMGA1P5, Length 271 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P5-201ENST00000412453 NISCHQ9Y2I1 1504 aa46.36■■■■■ 5.01
HMGA1P5-201ENST00000412453 CCDC180Q9P1Z9 1646 aa41.42■■■■■ 4.22
HMGA1P5-201ENST00000412453 ABCC9O60706 1549 aa40.69■■■■■ 4.1
HMGA1P5-201ENST00000412453 RB1CC1Q8TDY2 1594 aa39.1■■■■□ 3.85
HMGA1P5-201ENST00000412453 NACADO15069 1562 aa38.99■■■■□ 3.83
HMGA1P5-201ENST00000412453 DCAF8L2P0C7V8 631 aa38.78■■■■□ 3.8
HMGA1P5-201ENST00000412453 MYO15BQ96JP2 1530 aa38.68■■■■□ 3.78
HMGA1P5-201ENST00000412453 ZCCHC6Q5VYS8 1495 aaKnown RBP38.55■■■■□ 3.76
HMGA1P5-201ENST00000412453 DCAF1Q9Y4B6 1507 aa38.4■■■■□ 3.74
HMGA1P5-201ENST00000412453 UNC13AQ9UPW8 1703 aa38.18■■■■□ 3.7
HMGA1P5-201ENST00000412453 PABPN1Q86U42 306 aaKnown RBP eCLIP37.93■■■■□ 3.66
HMGA1P5-201ENST00000412453 BICRAQ9NZM4 1560 aa37.87■■■■□ 3.65
HMGA1P5-201ENST00000412453 SCRIBQ14160 1630 aa37.68■■■■□ 3.62
HMGA1P5-201ENST00000412453 SHROOM4Q9ULL8 1493 aa37.56■■■■□ 3.6
HMGA1P5-201ENST00000412453 DNAJC5BQ9UF47 199 aa37.55■■■■□ 3.6
HMGA1P5-201ENST00000412453 EIF4G1Q04637 1599 aaKnown RBP36.91■■■■□ 3.5
HMGA1P5-201ENST00000412453 CC2D2AQ9P2K1 1620 aa36.83■■■■□ 3.49
HMGA1P5-201ENST00000412453 CECR2Q9BXF3 1484 aa36.62■■■■□ 3.45
HMGA1P5-201ENST00000412453 SMARCA4P51532 1647 aa36.05■■■■□ 3.36
HMGA1P5-201ENST00000412453 BAZ1AQ9NRL2 1556 aaPredicted RBP35.98■■■■□ 3.35
HMGA1P5-201ENST00000412453 NCAPD3P42695 1498 aa35.95■■■■□ 3.35
HMGA1P5-201ENST00000412453 ATAD2BQ9ULI0 1458 aa35.9■■■■□ 3.34
HMGA1P5-201ENST00000412453 SMARCA2P51531 1590 aa35.89■■■■□ 3.34
HMGA1P5-201ENST00000412453 HMGXB3Q12766 1538 aa35.78■■■■□ 3.32
HMGA1P5-201ENST00000412453 PEG3Q9GZU2 1588 aa35.72■■■■□ 3.31
HMGA1P5-201ENST00000412453 MROH2BQ7Z745 1585 aa35.68■■■■□ 3.3
HMGA1P5-201ENST00000412453 BAZ1BQ9UIG0 1483 aaKnown RBP35.61■■■■□ 3.29
HMGA1P5-201ENST00000412453 WIZO95785 1651 aa35.3■■■■□ 3.24
HMGA1P5-201ENST00000412453 RSF1Q96T23 1441 aaPredicted RBP35.18■■■■□ 3.22
HMGA1P5-201ENST00000412453 ERCC6Q03468 1493 aa35.14■■■■□ 3.22
HMGA1P5-201ENST00000412453 NESP48681 1621 aa35.11■■■■□ 3.21
HMGA1P5-201ENST00000412453 LAMC3Q9Y6N6 1575 aa35.08■■■■□ 3.21
HMGA1P5-201ENST00000412453 TOP2AP11388 1531 aaKnown RBP34.95■■■■□ 3.19
HMGA1P5-201ENST00000412453 CUX2O14529 1486 aa34.91■■■■□ 3.18
HMGA1P5-201ENST00000412453 CADPSQ9ULU8 1353 aa34.87■■■■□ 3.17
HMGA1P5-201ENST00000412453 PDS5BQ9NTI5 1447 aa34.84■■■■□ 3.17
HMGA1P5-201ENST00000412453 KIF21AQ7Z4S6 1674 aa34.74■■■■□ 3.15
HMGA1P5-201ENST00000412453 THOC2Q8NI27 1593 aaKnown RBP34.7■■■■□ 3.14
HMGA1P5-201ENST00000412453 CFTRP13569 1480 aa34.61■■■■□ 3.13
HMGA1P5-201ENST00000412453 CCDC88BA6NC98 1476 aa34.5■■■■□ 3.11
HMGA1P5-201ENST00000412453 MRC2Q9UBG0 1479 aa34.48■■■■□ 3.11
HMGA1P5-201ENST00000412453 FANCD2Q9BXW9 1451 aa34.47■■■■□ 3.11
HMGA1P5-201ENST00000412453 CEP164Q9UPV0 1460 aa34.47■■■■□ 3.11
HMGA1P5-201ENST00000412453 PRDM2Q13029 1718 aa34.4■■■■□ 3.1
HMGA1P5-201ENST00000412453 WDR62O43379 1518 aa34.38■■■■□ 3.09
HMGA1P5-201ENST00000412453 DNAJC5Q9H3Z4 198 aa34.13■■■■□ 3.05
HMGA1P5-201ENST00000412453 URB2Q14146 1524 aaKnown RBP34.12■■■■□ 3.05
HMGA1P5-201ENST00000412453 SUPT5HO00267 1087 aaKnown RBP34.03■■■■□ 3.04
HMGA1P5-201ENST00000412453 ABCC8Q09428 1581 aa33.94■■■■□ 3.02
HMGA1P5-201ENST00000412453 TOPBP1Q92547 1522 aa33.89■■■■□ 3.02
HMGA1P5-201ENST00000412453 DNMBPQ6XZF7 1577 aa33.85■■■■□ 3.01
HMGA1P5-201ENST00000412453 IFT140Q96RY7 1462 aa33.77■■■■□ 3
HMGA1P5-201ENST00000412453 ZNF608Q9ULD9 1512 aaPredicted RBP33.58■■■□□ 2.97
HMGA1P5-201ENST00000412453 POLA1P09884 1462 aaPredicted RBP33.57■■■□□ 2.97
HMGA1P5-201ENST00000412453 TARBP1Q13395 1621 aaKnown RBP33.54■■■□□ 2.96
HMGA1P5-201ENST00000412453 CUX1P39880 1505 aa33.5■■■□□ 2.95
HMGA1P5-201ENST00000412453 EIF4G3O43432 1585 aaKnown RBP33.48■■■□□ 2.95
HMGA1P5-201ENST00000412453 FGD5Q6ZNL6 1462 aa33.45■■■□□ 2.95
HMGA1P5-201ENST00000412453 SOGA1O94964 1423 aa33.44■■■□□ 2.94
HMGA1P5-201ENST00000412453 RAD54L2Q9Y4B4 1467 aa33.39■■■□□ 2.94
HMGA1P5-201ENST00000412453 OSCARQ8IYS5 282 aa33.38■■■□□ 2.93
HMGA1P5-201ENST00000412453 AQRO60306 1485 aaKnown RBP eCLIP33.36■■■□□ 2.93
HMGA1P5-201ENST00000412453 WDR97A6NE52 1622 aa33.35■■■□□ 2.93
HMGA1P5-201ENST00000412453 TDRD9Q8NDG6 1382 aaKnown RBP33.24■■■□□ 2.91
HMGA1P5-201ENST00000412453 WRNQ14191 1432 aaPredicted RBP eCLIP33.2■■■□□ 2.91
HMGA1P5-201ENST00000412453 BIVM-ERCC5R4GMW8 1640 aa33.19■■■□□ 2.9
HMGA1P5-201ENST00000412453 TOP2BQ02880 1626 aa33.18■■■□□ 2.9
HMGA1P5-201ENST00000412453 ABCA10Q8WWZ4 1543 aa33.14■■■□□ 2.9
HMGA1P5-201ENST00000412453 CHD1O14646 1710 aa33.13■■■□□ 2.89
HMGA1P5-201ENST00000412453 SYNJ1O43426 1573 aa33.12■■■□□ 2.89
HMGA1P5-201ENST00000412453 GRIN2BQ13224 1484 aa33.11■■■□□ 2.89
HMGA1P5-201ENST00000412453 SNAPC4Q5SXM2 1469 aa33.07■■■□□ 2.88
HMGA1P5-201ENST00000412453 MAGI1Q96QZ7 1491 aaPredicted RBP33.06■■■□□ 2.88
HMGA1P5-201ENST00000412453 GAPVD1Q14C86 1478 aa33.05■■■□□ 2.88
HMGA1P5-201ENST00000412453 ABCA5Q8WWZ7 1642 aa33.03■■■□□ 2.88
HMGA1P5-201ENST00000412453 PBRM1Q86U86 1689 aa33.03■■■□□ 2.88
HMGA1P5-201ENST00000412453 FBLN2P98095 1184 aa33.02■■■□□ 2.88
HMGA1P5-201ENST00000412453 SYNJ2O15056 1496 aa32.93■■■□□ 2.86
HMGA1P5-201ENST00000412453 CHMP7Q8WUX9 453 aaPredicted RBP32.92■■■□□ 2.86
HMGA1P5-201ENST00000412453 RIMBP3CA6NJZ7 1639 aa32.87■■■□□ 2.85
HMGA1P5-201ENST00000412453 RIMBP3BA6NNM3 1639 aa32.87■■■□□ 2.85
HMGA1P5-201ENST00000412453 RIMBP3Q9UFD9 1639 aa32.87■■■□□ 2.85
HMGA1P5-201ENST00000412453 ARHGEF11O15085 1522 aa32.83■■■□□ 2.85
HMGA1P5-201ENST00000412453 TRIM41Q8WV44 630 aa32.83■■■□□ 2.85
HMGA1P5-201ENST00000412453 ERICH3Q5RHP9 1530 aa32.76■■■□□ 2.83
HMGA1P5-201ENST00000412453 CLASP1Q7Z460 1538 aa32.76■■■□□ 2.83
HMGA1P5-201ENST00000412453 ADAMTS12P58397 1594 aa32.74■■■□□ 2.83
HMGA1P5-201ENST00000412453 FHAD1B1AJZ9 1412 aa32.68■■■□□ 2.82
HMGA1P5-201ENST00000412453 GRIN2AQ12879 1464 aa32.67■■■□□ 2.82
HMGA1P5-201ENST00000412453 KIF27Q86VH2 1401 aa32.55■■■□□ 2.8
HMGA1P5-201ENST00000412453 ARAP1Q96P48 1450 aa32.54■■■□□ 2.8
HMGA1P5-201ENST00000412453 NUP160Q12769 1436 aa32.53■■■□□ 2.8
HMGA1P5-201ENST00000412453 CEP170Q5SW79 1584 aa32.5■■■□□ 2.79
HMGA1P5-201ENST00000412453 CYB5RLQ6IPT4 315 aa32.5■■■□□ 2.79
HMGA1P5-201ENST00000412453 CUL7Q14999 1698 aa32.42■■■□□ 2.78
HMGA1P5-201ENST00000412453 IGF1RP08069 1367 aa32.41■■■□□ 2.78
HMGA1P5-201ENST00000412453 SHROOM2Q13796 1616 aa32.34■■■□□ 2.77
HMGA1P5-201ENST00000412453 RUSC2Q8N2Y8 1516 aa32.26■■■□□ 2.75
HMGA1P5-201ENST00000412453 CARMIL1Q5VZK9 1371 aa32.23■■■□□ 2.75
HMGA1P5-201ENST00000412453 ERCC6L2Q5T890 1561 aa32.22■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms