RNA–Protein interactions for RNA: ENST00000525493.5

DKK3-203, Transcript of dickkopf WNT signaling pathway inhibitor 3, humanhuman

TSL 2 BASIC

Gene DKK3, Length 1,326 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3-203ENST00000525493 NISCHQ9Y2I1 1504 aa48.55■■■■■ 5.36
DKK3-203ENST00000525493 ABCC9O60706 1549 aa43.79■■■■■ 4.6
DKK3-203ENST00000525493 CCDC180Q9P1Z9 1646 aa43.62■■■■■ 4.57
DKK3-203ENST00000525493 RB1CC1Q8TDY2 1594 aa41.63■■■■■ 4.25
DKK3-203ENST00000525493 NACADO15069 1562 aa41.29■■■■■ 4.2
DKK3-203ENST00000525493 DCAF8L2P0C7V8 631 aa41.2■■■■■ 4.19
DKK3-203ENST00000525493 DNAJC5BQ9UF47 199 aa41.07■■■■■ 4.17
DKK3-203ENST00000525493 PABPN1Q86U42 306 aaKnown RBP eCLIP40.76■■■■■ 4.12
DKK3-203ENST00000525493 MYO15BQ96JP2 1530 aa40.62■■■■■ 4.09
DKK3-203ENST00000525493 UNC13AQ9UPW8 1703 aa40.62■■■■■ 4.09
DKK3-203ENST00000525493 BICRAQ9NZM4 1560 aa40.32■■■■■ 4.05
DKK3-203ENST00000525493 ZCCHC6Q5VYS8 1495 aaKnown RBP40.28■■■■■ 4.04
DKK3-203ENST00000525493 DCAF1Q9Y4B6 1507 aa40.11■■■■■ 4.01
DKK3-203ENST00000525493 SHROOM4Q9ULL8 1493 aa39.82■■■■□ 3.96
DKK3-203ENST00000525493 SCRIBQ14160 1630 aa39.8■■■■□ 3.96
DKK3-203ENST00000525493 CC2D2AQ9P2K1 1620 aa39.52■■■■□ 3.92
DKK3-203ENST00000525493 CECR2Q9BXF3 1484 aa39.45■■■■□ 3.91
DKK3-203ENST00000525493 EIF4G1Q04637 1599 aaKnown RBP39.4■■■■□ 3.9
DKK3-203ENST00000525493 NCAPD3P42695 1498 aa38.08■■■■□ 3.69
DKK3-203ENST00000525493 ATAD2BQ9ULI0 1458 aa37.97■■■■□ 3.67
DKK3-203ENST00000525493 SMARCA4P51532 1647 aa37.92■■■■□ 3.66
DKK3-203ENST00000525493 SMARCA2P51531 1590 aa37.91■■■■□ 3.66
DKK3-203ENST00000525493 ERCC6Q03468 1493 aa37.89■■■■□ 3.66
DKK3-203ENST00000525493 DNAJC5Q9H3Z4 198 aa37.85■■■■□ 3.65
DKK3-203ENST00000525493 HMGXB3Q12766 1538 aa37.81■■■■□ 3.64
DKK3-203ENST00000525493 CUX2O14529 1486 aa37.77■■■■□ 3.64
DKK3-203ENST00000525493 BAZ1AQ9NRL2 1556 aaPredicted RBP37.73■■■■□ 3.63
DKK3-203ENST00000525493 BAZ1BQ9UIG0 1483 aaKnown RBP37.66■■■■□ 3.62
DKK3-203ENST00000525493 NESP48681 1621 aa37.55■■■■□ 3.6
DKK3-203ENST00000525493 PEG3Q9GZU2 1588 aa37.49■■■■□ 3.59
DKK3-203ENST00000525493 MROH2BQ7Z745 1585 aa37.41■■■■□ 3.58
DKK3-203ENST00000525493 LAMC3Q9Y6N6 1575 aa37.28■■■■□ 3.56
DKK3-203ENST00000525493 THOC2Q8NI27 1593 aaKnown RBP37.17■■■■□ 3.54
DKK3-203ENST00000525493 PDS5BQ9NTI5 1447 aa37.12■■■■□ 3.53
DKK3-203ENST00000525493 KIF21AQ7Z4S6 1674 aa37.07■■■■□ 3.52
DKK3-203ENST00000525493 WIZO95785 1651 aa36.98■■■■□ 3.51
DKK3-203ENST00000525493 CADPSQ9ULU8 1353 aa36.96■■■■□ 3.51
DKK3-203ENST00000525493 MRC2Q9UBG0 1479 aa36.78■■■■□ 3.48
DKK3-203ENST00000525493 RSF1Q96T23 1441 aaPredicted RBP36.75■■■■□ 3.47
DKK3-203ENST00000525493 WDR62O43379 1518 aa36.65■■■■□ 3.46
DKK3-203ENST00000525493 CEP164Q9UPV0 1460 aa36.64■■■■□ 3.46
DKK3-203ENST00000525493 FANCD2Q9BXW9 1451 aa36.57■■■■□ 3.44
DKK3-203ENST00000525493 TOP2AP11388 1531 aaKnown RBP36.51■■■■□ 3.44
DKK3-203ENST00000525493 CFTRP13569 1480 aa36.49■■■■□ 3.43
DKK3-203ENST00000525493 TRIM41Q8WV44 630 aa36.28■■■■□ 3.4
DKK3-203ENST00000525493 URB2Q14146 1524 aaKnown RBP36.23■■■■□ 3.39
DKK3-203ENST00000525493 PRDM2Q13029 1718 aa36.15■■■■□ 3.38
DKK3-203ENST00000525493 CCDC88BA6NC98 1476 aa36.12■■■■□ 3.37
DKK3-203ENST00000525493 OSCARQ8IYS5 282 aa36.07■■■■□ 3.36
DKK3-203ENST00000525493 IFT140Q96RY7 1462 aa35.88■■■■□ 3.33
DKK3-203ENST00000525493 TOPBP1Q92547 1522 aa35.84■■■■□ 3.33
DKK3-203ENST00000525493 ZNF608Q9ULD9 1512 aaPredicted RBP35.8■■■■□ 3.32
DKK3-203ENST00000525493 ABCC8Q09428 1581 aa35.78■■■■□ 3.32
DKK3-203ENST00000525493 DNMBPQ6XZF7 1577 aa35.71■■■■□ 3.31
DKK3-203ENST00000525493 EIF4G3O43432 1585 aaKnown RBP35.62■■■■□ 3.29
DKK3-203ENST00000525493 RIMBP3CA6NJZ7 1639 aa35.57■■■■□ 3.28
DKK3-203ENST00000525493 RIMBP3BA6NNM3 1639 aa35.57■■■■□ 3.28
DKK3-203ENST00000525493 RIMBP3Q9UFD9 1639 aa35.57■■■■□ 3.28
DKK3-203ENST00000525493 AQRO60306 1485 aaKnown RBP eCLIP35.49■■■■□ 3.27
DKK3-203ENST00000525493 TARBP1Q13395 1621 aaKnown RBP35.49■■■■□ 3.27
DKK3-203ENST00000525493 POLA1P09884 1462 aaPredicted RBP35.46■■■■□ 3.27
DKK3-203ENST00000525493 ARHGEF11O15085 1522 aa35.45■■■■□ 3.27
DKK3-203ENST00000525493 FBLN2P98095 1184 aa35.4■■■■□ 3.26
DKK3-203ENST00000525493 CHD1O14646 1710 aa35.39■■■■□ 3.26
DKK3-203ENST00000525493 RAD54L2Q9Y4B4 1467 aa35.34■■■■□ 3.25
DKK3-203ENST00000525493 SOGA1O94964 1423 aa35.33■■■■□ 3.25
DKK3-203ENST00000525493 SUPT5HO00267 1087 aaKnown RBP35.31■■■■□ 3.24
DKK3-203ENST00000525493 TDRD9Q8NDG6 1382 aaKnown RBP35.27■■■■□ 3.24
DKK3-203ENST00000525493 CYB5RLQ6IPT4 315 aa35.26■■■■□ 3.23
DKK3-203ENST00000525493 FGD5Q6ZNL6 1462 aa35.24■■■■□ 3.23
DKK3-203ENST00000525493 CUX1P39880 1505 aa35.16■■■■□ 3.22
DKK3-203ENST00000525493 WDR97A6NE52 1622 aa35.15■■■■□ 3.22
DKK3-203ENST00000525493 SNAPC4Q5SXM2 1469 aa35.15■■■■□ 3.22
DKK3-203ENST00000525493 CHMP7Q8WUX9 453 aaPredicted RBP35.08■■■■□ 3.21
DKK3-203ENST00000525493 ARAP1Q96P48 1450 aa35.08■■■■□ 3.21
DKK3-203ENST00000525493 MAGI1Q96QZ7 1491 aaPredicted RBP35.04■■■■□ 3.2
DKK3-203ENST00000525493 GRIN2BQ13224 1484 aa35.03■■■■□ 3.2
DKK3-203ENST00000525493 SYNJ1O43426 1573 aa34.99■■■■□ 3.19
DKK3-203ENST00000525493 TRHP20396 242 aaPredicted RBP34.97■■■■□ 3.19
DKK3-203ENST00000525493 CLASP1Q7Z460 1538 aa34.93■■■■□ 3.18
DKK3-203ENST00000525493 SYNJ2O15056 1496 aa34.92■■■■□ 3.18
DKK3-203ENST00000525493 GAPVD1Q14C86 1478 aa34.9■■■■□ 3.18
DKK3-203ENST00000525493 PBRM1Q86U86 1689 aa34.89■■■■□ 3.18
DKK3-203ENST00000525493 ABCA10Q8WWZ4 1543 aa34.81■■■■□ 3.16
DKK3-203ENST00000525493 ABCA5Q8WWZ7 1642 aa34.76■■■■□ 3.16
DKK3-203ENST00000525493 WRNQ14191 1432 aaPredicted RBP eCLIP34.7■■■■□ 3.14
DKK3-203ENST00000525493 TOP2BQ02880 1626 aa34.61■■■■□ 3.13
DKK3-203ENST00000525493 BIVM-ERCC5R4GMW8 1640 aa34.6■■■■□ 3.13
DKK3-203ENST00000525493 GRIN2AQ12879 1464 aa34.57■■■■□ 3.12
DKK3-203ENST00000525493 ADAMTS12P58397 1594 aa34.53■■■■□ 3.12
DKK3-203ENST00000525493 FHAD1B1AJZ9 1412 aa34.45■■■■□ 3.11
DKK3-203ENST00000525493 CEP170Q5SW79 1584 aa34.43■■■■□ 3.1
DKK3-203ENST00000525493 NUP160Q12769 1436 aa34.43■■■■□ 3.1
DKK3-203ENST00000525493 ERICH3Q5RHP9 1530 aa34.39■■■■□ 3.1
DKK3-203ENST00000525493 ERCC6L2Q5T890 1561 aa34.38■■■■□ 3.09
DKK3-203ENST00000525493 SHROOM2Q13796 1616 aa34.26■■■■□ 3.08
DKK3-203ENST00000525493 PRG4Q92954 1404 aaPredicted RBP34.16■■■■□ 3.06
DKK3-203ENST00000525493 JPH4Q96JJ6 628 aa34.13■■■■□ 3.05
DKK3-203ENST00000525493 AEBP2Q6ZN18 517 aaPredicted RBP34.06■■■■□ 3.04
DKK3-203ENST00000525493 RUSC2Q8N2Y8 1516 aa34.04■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms