RNA–Protein interactions for RNA: ENST00000308527.5

SNX33-201, Transcript of sorting nexin 33, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX33, Length 8,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX33-201ENST00000308527 DCAF8L2P0C7V8 631 aa21.57■■□□□ 1.04
SNX33-201ENST00000308527 PELP1Q8IZL8 1130 aaKnown RBP20.67■□□□□ 0.9
SNX33-201ENST00000308527 SUPT5HO00267 1087 aaKnown RBP20.22■□□□□ 0.83
SNX33-201ENST00000308527 APLP2Q06481 763 aa20■□□□□ 0.79
SNX33-201ENST00000308527 FAM9AQ8IZU1 332 aaPredicted RBP19.99■□□□□ 0.79
SNX33-201ENST00000308527 EHMT2Q96KQ7 1210 aa19.97■□□□□ 0.79
SNX33-201ENST00000308527 ERICH6Q7L0X2 663 aa19.82■□□□□ 0.76
SNX33-201ENST00000308527 CCER1Q8TC90 406 aaPredicted RBP19.75■□□□□ 0.75
SNX33-201ENST00000308527 SHROOM4Q9ULL8 1493 aa19.7■□□□□ 0.74
SNX33-201ENST00000308527 CENPBP07199 599 aaPredicted RBP19.38■□□□□ 0.69
SNX33-201ENST00000308527 TTBK1Q5TCY1 1321 aaPredicted RBP19.35■□□□□ 0.69
SNX33-201ENST00000308527 NISCHQ9Y2I1 1504 aa19.27■□□□□ 0.68
SNX33-201ENST00000308527 ATP1B4Q9UN42 357 aaPredicted RBP19.22■□□□□ 0.67
SNX33-201ENST00000308527 PCGF6Q9BYE7 350 aa19.21■□□□□ 0.67
SNX33-201ENST00000308527 NEFLP07196 543 aa19.2■□□□□ 0.66
SNX33-201ENST00000308527 RANGAP1P46060 587 aaPredicted RBP19.13■□□□□ 0.65
SNX33-201ENST00000308527 ZEB1P37275 1124 aaPredicted RBP19.11■□□□□ 0.65
SNX33-201ENST00000308527 MYT1Q01538 1121 aa19.01■□□□□ 0.63
SNX33-201ENST00000308527 DAXXQ9UER7 740 aaPredicted RBP18.97■□□□□ 0.63
SNX33-201ENST00000308527 UBTFP17480 764 aaKnown RBP18.82■□□□□ 0.6
SNX33-201ENST00000308527 YTHDC1Q96MU7 727 aaKnown RBP18.79■□□□□ 0.6
SNX33-201ENST00000308527 TRIM41Q8WV44 630 aa18.78■□□□□ 0.6
SNX33-201ENST00000308527 MYT1LQ9UL68 1186 aa18.73■□□□□ 0.59
SNX33-201ENST00000308527 POLR3GLQ9BT43 218 aa18.57■□□□□ 0.56
SNX33-201ENST00000308527 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.46■□□□□ 0.54
SNX33-201ENST00000308527 HNRNPUL2Q1KMD3 747 aaKnown RBP18.46■□□□□ 0.54
SNX33-201ENST00000308527 SLC4A1APQ9BWU0 796 aaKnown RBP18.46■□□□□ 0.54
SNX33-201ENST00000308527 ZNF316A6NFI3 1004 aaPredicted RBP18.45■□□□□ 0.54
SNX33-201ENST00000308527 CHIC1Q5VXU3 224 aa18.38■□□□□ 0.53
SNX33-201ENST00000308527 CLSPNQ9HAW4 1339 aa18.36■□□□□ 0.53
SNX33-201ENST00000308527 RTL5Q5HYW3 569 aaPredicted RBP18.32■□□□□ 0.52
SNX33-201ENST00000308527 ITGAEP38570 1179 aa18.31■□□□□ 0.52
SNX33-201ENST00000308527 CNGB1Q14028 1251 aaPredicted RBP18.28■□□□□ 0.52
SNX33-201ENST00000308527 PPARGC1BQ86YN6 1023 aaKnown RBP18.27■□□□□ 0.52
SNX33-201ENST00000308527 TRIM26Q12899 539 aaPredicted RBP18.18■□□□□ 0.5
SNX33-201ENST00000308527 ZBTB47Q9UFB7 747 aaPredicted RBP18.12■□□□□ 0.49
SNX33-201ENST00000308527 HRCP23327 699 aa17.96■□□□□ 0.47
SNX33-201ENST00000308527 SLC24A1O60721 1099 aa17.95■□□□□ 0.46
SNX33-201ENST00000308527 FAM50AQ14320 339 aaKnown RBP17.83■□□□□ 0.44
SNX33-201ENST00000308527 TRIM52Q96A61 297 aa17.83■□□□□ 0.44
SNX33-201ENST00000308527 NEFMP07197 916 aa17.81■□□□□ 0.44
SNX33-201ENST00000308527 CANXP27824 592 aaKnown RBP17.81■□□□□ 0.44
SNX33-201ENST00000308527 CDK11AQ9UQ88 783 aaPredicted RBP17.77■□□□□ 0.43
SNX33-201ENST00000308527 DIEXFQ68CQ4 756 aaKnown RBP17.76■□□□□ 0.43
SNX33-201ENST00000308527 BCL11AQ9H165 835 aa17.76■□□□□ 0.43
SNX33-201ENST00000308527 BCANQ96GW7 911 aa17.73■□□□□ 0.43
SNX33-201ENST00000308527 ANP32CO43423 234 aa17.69■□□□□ 0.42
SNX33-201ENST00000308527 NEUROD1Q13562 356 aa17.68■□□□□ 0.42
SNX33-201ENST00000308527 ZNF326Q5BKZ1 582 aaKnown RBP17.65■□□□□ 0.42
SNX33-201ENST00000308527 ANP32BQ92688 251 aaKnown RBP17.64■□□□□ 0.41
SNX33-201ENST00000308527 LOC105371045A0A1W2PR82 267 aa17.57■□□□□ 0.4
SNX33-201ENST00000308527 ANP32AP39687 249 aaKnown RBP17.55■□□□□ 0.4
SNX33-201ENST00000308527 ABCC9O60706 1549 aa17.51■□□□□ 0.39
SNX33-201ENST00000308527 HSP90AA1P07900 732 aaKnown RBP17.51■□□□□ 0.39
SNX33-201ENST00000308527 FBLN2P98095 1184 aa17.44■□□□□ 0.38
SNX33-201ENST00000308527 ESF1Q9H501 851 aaKnown RBP17.42■□□□□ 0.38
SNX33-201ENST00000308527 UPF2Q9HAU5 1272 aaKnown RBP17.41■□□□□ 0.38
SNX33-201ENST00000308527 NPM2Q86SE8 214 aaKnown RBP17.37■□□□□ 0.37
SNX33-201ENST00000308527 CDK11BP21127 795 aaKnown RBP17.36■□□□□ 0.37
SNX33-201ENST00000308527 GLIPR1L2Q4G1C9 344 aa17.35■□□□□ 0.37
SNX33-201ENST00000308527 GTF3C3Q9Y5Q9 886 aa17.35■□□□□ 0.37
SNX33-201ENST00000308527 EIF5BO60841 1220 aaKnown RBP17.32■□□□□ 0.36
SNX33-201ENST00000308527 STAG3Q9UJ98 1225 aa17.31■□□□□ 0.36
SNX33-201ENST00000308527 PABPN1Q86U42 306 aaKnown RBP eCLIP17.21■□□□□ 0.34
SNX33-201ENST00000308527 PLPPR3Q6T4P5 718 aa17.18■□□□□ 0.34
SNX33-201ENST00000308527 ZNF777Q9ULD5 760 aaPredicted RBP17.18■□□□□ 0.34
SNX33-201ENST00000308527 CHGAP10645 457 aaKnown RBP17.15■□□□□ 0.34
SNX33-201ENST00000308527 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.12■□□□□ 0.33
SNX33-201ENST00000308527 ARID3CA6NKF2 412 aa17.1■□□□□ 0.33
SNX33-201ENST00000308527 SCAF1Q9H7N4 1312 aaKnown RBP17.1■□□□□ 0.33
SNX33-201ENST00000308527 MYH16Q9H6N6 1097 aa17.07■□□□□ 0.32
SNX33-201ENST00000308527 A0A0G2JS52 829 aa17.05■□□□□ 0.32
SNX33-201ENST00000308527 P3H3Q8IVL6 736 aa17.05■□□□□ 0.32
SNX33-201ENST00000308527 TONSLQ96HA7 1378 aa17.03■□□□□ 0.32
SNX33-201ENST00000308527 NPM1P06748 294 aaKnown RBP eCLIP17.02■□□□□ 0.32
SNX33-201ENST00000308527 ARXQ96QS3 562 aa17.01■□□□□ 0.31
SNX33-201ENST00000308527 WDR43Q15061 677 aaKnown RBP eCLIP17.01■□□□□ 0.31
SNX33-201ENST00000308527 FKBP8Q14318 412 aa17■□□□□ 0.31
SNX33-201ENST00000308527 NCLP19338 710 aaKnown RBP16.97■□□□□ 0.31
SNX33-201ENST00000308527 HNRNPUQ00839 825 aaKnown RBP eCLIP16.97■□□□□ 0.31
SNX33-201ENST00000308527 TMC1Q8TDI8 760 aa16.97■□□□□ 0.31
SNX33-201ENST00000308527 FAM9BQ8IZU0 186 aa16.96■□□□□ 0.31
SNX33-201ENST00000308527 SALL2Q9Y467 1007 aaPredicted RBP16.96■□□□□ 0.31
SNX33-201ENST00000308527 CCDC136Q96JN2 1154 aa16.95■□□□□ 0.3
SNX33-201ENST00000308527 NBR1Q14596 966 aa16.94■□□□□ 0.3
SNX33-201ENST00000308527 ACIN1Q9UKV3 1341 aaKnown RBP16.92■□□□□ 0.3
SNX33-201ENST00000308527 ZRSR1Q15695 479 aaKnown RBP16.91■□□□□ 0.3
SNX33-201ENST00000308527 TRIM44Q96DX7 344 aaPredicted RBP16.9■□□□□ 0.3
SNX33-201ENST00000308527 TNNT2P45379 298 aaPredicted RBP16.87■□□□□ 0.29
SNX33-201ENST00000308527 BECN1Q14457 450 aa16.87■□□□□ 0.29
SNX33-201ENST00000308527 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.87■□□□□ 0.29
SNX33-201ENST00000308527 ZBTB7CA1YPR0 619 aa16.85■□□□□ 0.29
SNX33-201ENST00000308527 GOLGA6L22H0YM25 854 aa16.85■□□□□ 0.29
SNX33-201ENST00000308527 ANP32EQ9BTT0 268 aa16.84■□□□□ 0.29
SNX33-201ENST00000308527 TULP1O00294 542 aaPredicted RBP16.84■□□□□ 0.29
SNX33-201ENST00000308527 C14orf37Q86TY3 774 aa16.84■□□□□ 0.29
SNX33-201ENST00000308527 CASC1Q6TDU7 716 aa16.82■□□□□ 0.28
SNX33-201ENST00000308527 DDRGK1Q96HY6 314 aa16.81■□□□□ 0.28
SNX33-201ENST00000308527 HAP1P54257 671 aaPredicted RBP16.78■□□□□ 0.28
SNX33-201ENST00000308527 DDX10Q13206 875 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms