Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LMO3Q8TAP4 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.08■□□□□ 0.32
LMO3Q8TAP4 AC087481.3-201ENST00000602886 1894 ntBASIC17.07■□□□□ 0.32
LMO3Q8TAP4 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 TUBB3P1-201ENST00000405796 1332 ntBASIC17.07■□□□□ 0.32
LMO3Q8TAP4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.07■□□□□ 0.32
LMO3Q8TAP4 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LMO3Q8TAP4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
LMO3Q8TAP4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.06■□□□□ 0.32
LMO3Q8TAP4 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LMO3Q8TAP4 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LMO3Q8TAP4 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LMO3Q8TAP4 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LMO3Q8TAP4 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LMO3Q8TAP4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.06■□□□□ 0.32
LMO3Q8TAP4 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LMO3Q8TAP4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LMO3Q8TAP4 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LMO3Q8TAP4 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.06■□□□□ 0.32
LMO3Q8TAP4 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LMO3Q8TAP4 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LMO3Q8TAP4 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.06■□□□□ 0.32
LMO3Q8TAP4 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.06■□□□□ 0.32
LMO3Q8TAP4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LMO3Q8TAP4 HLA-V-204ENST00000476601 1289 ntBASIC17.06■□□□□ 0.32
LMO3Q8TAP4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LMO3Q8TAP4 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LMO3Q8TAP4 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LMO3Q8TAP4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.06■□□□□ 0.32
LMO3Q8TAP4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.06■□□□□ 0.32
LMO3Q8TAP4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.06■□□□□ 0.32
LMO3Q8TAP4 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.06■□□□□ 0.32
LMO3Q8TAP4 AL138828.2-201ENST00000615812 383 ntBASIC17.06■□□□□ 0.32
LMO3Q8TAP4 SPDYE12P-201ENST00000618416 771 ntBASIC17.06■□□□□ 0.32
LMO3Q8TAP4 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.06■□□□□ 0.32
LMO3Q8TAP4 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LMO3Q8TAP4 CETN4P-206ENST00000642099 2168 ntBASIC17.06■□□□□ 0.32
LMO3Q8TAP4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LMO3Q8TAP4 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LMO3Q8TAP4 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.06■□□□□ 0.32
LMO3Q8TAP4 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LMO3Q8TAP4 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LMO3Q8TAP4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LMO3Q8TAP4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LMO3Q8TAP4 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.05■□□□□ 0.32
LMO3Q8TAP4 AC144831.1-201ENST00000573312 2656 ntBASIC17.05■□□□□ 0.32
LMO3Q8TAP4 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LMO3Q8TAP4 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LMO3Q8TAP4 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LMO3Q8TAP4 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LMO3Q8TAP4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.05■□□□□ 0.32
LMO3Q8TAP4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms