Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN20P56880 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.74□□□□□ -0.05
CLDN20P56880 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN20P56880 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN20P56880 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN20P56880 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN20P56880 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
CLDN20P56880 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN20P56880 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CLDN20P56880 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN20P56880 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.74□□□□□ -0.05
CLDN20P56880 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.74□□□□□ -0.05
CLDN20P56880 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.74□□□□□ -0.05
CLDN20P56880 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.74□□□□□ -0.05
CLDN20P56880 AC027796.2-201ENST00000575326 344 ntBASIC14.74□□□□□ -0.05
CLDN20P56880 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.74□□□□□ -0.05
CLDN20P56880 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.74□□□□□ -0.05
CLDN20P56880 AC106028.4-201ENST00000614509 607 ntBASIC14.74□□□□□ -0.05
CLDN20P56880 AP001059.3-201ENST00000619053 235 ntBASIC14.74□□□□□ -0.05
CLDN20P56880 Z92544.3-201ENST00000624747 417 ntBASIC14.74□□□□□ -0.05
CLDN20P56880 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN20P56880 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN20P56880 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN20P56880 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN20P56880 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CLDN20P56880 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN20P56880 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN20P56880 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.74□□□□□ -0.05
CLDN20P56880 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN20P56880 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
CLDN20P56880 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.74□□□□□ -0.05
CLDN20P56880 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CLDN20P56880 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN20P56880 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CLDN20P56880 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN20P56880 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN20P56880 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN20P56880 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN20P56880 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.73□□□□□ -0.05
CLDN20P56880 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CLDN20P56880 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN20P56880 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN20P56880 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
CLDN20P56880 AP3S2-216ENST00000617003 1561 ntBASIC14.73□□□□□ -0.05
CLDN20P56880 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.73□□□□□ -0.05
CLDN20P56880 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN20P56880 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.73□□□□□ -0.05
CLDN20P56880 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.73□□□□□ -0.05
CLDN20P56880 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN20P56880 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN20P56880 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN20P56880 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CLDN20P56880 AL645939.2-201ENST00000427340 991 ntBASIC14.73□□□□□ -0.05
CLDN20P56880 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.73□□□□□ -0.05
CLDN20P56880 AC098859.1-201ENST00000502915 1238 ntBASIC14.73□□□□□ -0.05
CLDN20P56880 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.73□□□□□ -0.05
CLDN20P56880 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.73□□□□□ -0.05
CLDN20P56880 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.73□□□□□ -0.05
CLDN20P56880 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CLDN20P56880 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.73□□□□□ -0.05
CLDN20P56880 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN20P56880 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.73□□□□□ -0.05
CLDN20P56880 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN20P56880 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CLDN20P56880 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN20P56880 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN20P56880 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CLDN20P56880 AL009178.2-201ENST00000597278 2719 ntBASIC14.73□□□□□ -0.05
CLDN20P56880 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.73□□□□□ -0.05
CLDN20P56880 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CLDN20P56880 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CLDN20P56880 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN20P56880 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.73□□□□□ -0.05
CLDN20P56880 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN20P56880 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN20P56880 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN20P56880 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CLDN20P56880 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
CLDN20P56880 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CLDN20P56880 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.72□□□□□ -0.05
CLDN20P56880 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN20P56880 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.72□□□□□ -0.05
CLDN20P56880 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN20P56880 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN20P56880 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.72□□□□□ -0.05
CLDN20P56880 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
CLDN20P56880 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN20P56880 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN20P56880 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN20P56880 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CLDN20P56880 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.72□□□□□ -0.05
CLDN20P56880 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN20P56880 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN20P56880 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CLDN20P56880 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN20P56880 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN20P56880 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN20P56880 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN20P56880 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN20P56880 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms