Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC27.3■■□□□ 1.96
TRIM41Q8WV44 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC27.3■■□□□ 1.96
TRIM41Q8WV44 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
TRIM41Q8WV44 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
TRIM41Q8WV44 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC27.29■■□□□ 1.96
TRIM41Q8WV44 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC27.29■■□□□ 1.96
TRIM41Q8WV44 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
TRIM41Q8WV44 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC27.29■■□□□ 1.96
TRIM41Q8WV44 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
TRIM41Q8WV44 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
TRIM41Q8WV44 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
TRIM41Q8WV44 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC27.29■■□□□ 1.96
TRIM41Q8WV44 AC098850.1-201ENST00000419919 790 ntBASIC27.29■■□□□ 1.96
TRIM41Q8WV44 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC27.29■■□□□ 1.96
TRIM41Q8WV44 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC27.29■■□□□ 1.96
TRIM41Q8WV44 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC27.29■■□□□ 1.96
TRIM41Q8WV44 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
TRIM41Q8WV44 AP003419.4-201ENST00000616071 517 ntBASIC27.29■■□□□ 1.96
TRIM41Q8WV44 KRT8P12-202ENST00000472924 1397 ntBASIC27.29■■□□□ 1.96
TRIM41Q8WV44 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC27.29■■□□□ 1.96
TRIM41Q8WV44 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC27.29■■□□□ 1.96
TRIM41Q8WV44 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
TRIM41Q8WV44 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
TRIM41Q8WV44 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC27.29■■□□□ 1.96
TRIM41Q8WV44 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC27.29■■□□□ 1.96
TRIM41Q8WV44 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
TRIM41Q8WV44 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
TRIM41Q8WV44 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TRIM41Q8WV44 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
TRIM41Q8WV44 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
TRIM41Q8WV44 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC27.28■■□□□ 1.96
TRIM41Q8WV44 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TRIM41Q8WV44 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TRIM41Q8WV44 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
TRIM41Q8WV44 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TRIM41Q8WV44 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TRIM41Q8WV44 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC27.28■■□□□ 1.96
TRIM41Q8WV44 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC27.28■■□□□ 1.96
TRIM41Q8WV44 RIT1-205ENST00000539040 919 ntTSL 2 BASIC27.28■■□□□ 1.96
TRIM41Q8WV44 AL512361.1-201ENST00000554200 418 ntBASIC27.28■■□□□ 1.96
TRIM41Q8WV44 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
TRIM41Q8WV44 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC27.28■■□□□ 1.96
TRIM41Q8WV44 AL662844.4-201ENST00000606367 2838 ntBASIC27.28■■□□□ 1.96
TRIM41Q8WV44 HR-201ENST00000312841 5351 ntTSL 5 BASIC27.28■■□□□ 1.96
TRIM41Q8WV44 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TRIM41Q8WV44 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC27.28■■□□□ 1.96
TRIM41Q8WV44 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TRIM41Q8WV44 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC27.27■■□□□ 1.96
TRIM41Q8WV44 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC27.27■■□□□ 1.96
TRIM41Q8WV44 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
TRIM41Q8WV44 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC27.27■■□□□ 1.96
TRIM41Q8WV44 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
TRIM41Q8WV44 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
TRIM41Q8WV44 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
TRIM41Q8WV44 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
TRIM41Q8WV44 CYP4F24P-201ENST00000586049 1580 ntBASIC27.27■■□□□ 1.96
TRIM41Q8WV44 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
TRIM41Q8WV44 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
TRIM41Q8WV44 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC27.27■■□□□ 1.96
TRIM41Q8WV44 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
TRIM41Q8WV44 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
TRIM41Q8WV44 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC27.27■■□□□ 1.96
TRIM41Q8WV44 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC27.27■■□□□ 1.96
TRIM41Q8WV44 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
TRIM41Q8WV44 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC27.27■■□□□ 1.96
TRIM41Q8WV44 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
TRIM41Q8WV44 RPL13AP20-201ENST00000459725 609 ntBASIC27.27■■□□□ 1.96
TRIM41Q8WV44 ARTN-209ENST00000479128 471 ntTSL 3 BASIC27.27■■□□□ 1.96
TRIM41Q8WV44 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC27.27■■□□□ 1.96
TRIM41Q8WV44 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC27.27■■□□□ 1.96
TRIM41Q8WV44 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC27.27■■□□□ 1.96
TRIM41Q8WV44 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC27.27■■□□□ 1.96
TRIM41Q8WV44 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC27.27■■□□□ 1.96
TRIM41Q8WV44 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
TRIM41Q8WV44 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
TRIM41Q8WV44 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
TRIM41Q8WV44 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.96
TRIM41Q8WV44 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC27.26■■□□□ 1.96
TRIM41Q8WV44 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
TRIM41Q8WV44 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC27.26■■□□□ 1.96
TRIM41Q8WV44 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC27.26■■□□□ 1.96
TRIM41Q8WV44 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
TRIM41Q8WV44 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
TRIM41Q8WV44 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TRIM41Q8WV44 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
TRIM41Q8WV44 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC27.26■■□□□ 1.95
TRIM41Q8WV44 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TRIM41Q8WV44 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
TRIM41Q8WV44 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TRIM41Q8WV44 APOA1-205ENST00000375329 927 ntTSL 2 BASIC27.26■■□□□ 1.95
TRIM41Q8WV44 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
TRIM41Q8WV44 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TRIM41Q8WV44 RAB35-202ENST00000534951 939 ntTSL 2 BASIC27.26■■□□□ 1.95
TRIM41Q8WV44 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC27.26■■□□□ 1.95
TRIM41Q8WV44 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC27.26■■□□□ 1.95
TRIM41Q8WV44 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC27.26■■□□□ 1.95
TRIM41Q8WV44 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC27.26■■□□□ 1.95
TRIM41Q8WV44 RPSAP52-203ENST00000622976 1023 ntBASIC27.26■■□□□ 1.95
TRIM41Q8WV44 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC27.26■■□□□ 1.95
TRIM41Q8WV44 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms