Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NCKAP1LP55160 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
NCKAP1LP55160 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
NCKAP1LP55160 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCKAP1LP55160 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.5■□□□□ 0.39
NCKAP1LP55160 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NCKAP1LP55160 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
NCKAP1LP55160 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.5■□□□□ 0.39
NCKAP1LP55160 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.5■□□□□ 0.39
NCKAP1LP55160 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NCKAP1LP55160 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCKAP1LP55160 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCKAP1LP55160 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCKAP1LP55160 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NCKAP1LP55160 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCKAP1LP55160 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCKAP1LP55160 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCKAP1LP55160 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.49■□□□□ 0.39
NCKAP1LP55160 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCKAP1LP55160 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NCKAP1LP55160 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCKAP1LP55160 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCKAP1LP55160 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.49■□□□□ 0.39
NCKAP1LP55160 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.49■□□□□ 0.39
NCKAP1LP55160 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
NCKAP1LP55160 AC074338.1-201ENST00000416825 156 ntBASIC17.49■□□□□ 0.39
NCKAP1LP55160 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.49■□□□□ 0.39
NCKAP1LP55160 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.49■□□□□ 0.39
NCKAP1LP55160 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.49■□□□□ 0.39
NCKAP1LP55160 HMGN1P19-201ENST00000436976 333 ntBASIC17.49■□□□□ 0.39
NCKAP1LP55160 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.49■□□□□ 0.39
NCKAP1LP55160 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.49■□□□□ 0.39
NCKAP1LP55160 SDHAP3-202ENST00000515467 728 ntBASIC17.49■□□□□ 0.39
NCKAP1LP55160 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NCKAP1LP55160 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.49■□□□□ 0.39
NCKAP1LP55160 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NCKAP1LP55160 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.49■□□□□ 0.39
NCKAP1LP55160 SPCS2P1-201ENST00000561636 679 ntBASIC17.49■□□□□ 0.39
NCKAP1LP55160 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.49■□□□□ 0.39
NCKAP1LP55160 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.49■□□□□ 0.39
NCKAP1LP55160 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.49■□□□□ 0.39
NCKAP1LP55160 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCKAP1LP55160 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.49■□□□□ 0.39
NCKAP1LP55160 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NCKAP1LP55160 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCKAP1LP55160 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCKAP1LP55160 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCKAP1LP55160 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCKAP1LP55160 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCKAP1LP55160 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
NCKAP1LP55160 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCKAP1LP55160 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
NCKAP1LP55160 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCKAP1LP55160 AL607033.1-201ENST00000623900 1599 ntBASIC17.49■□□□□ 0.39
NCKAP1LP55160 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCKAP1LP55160 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCKAP1LP55160 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCKAP1LP55160 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCKAP1LP55160 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NCKAP1LP55160 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCKAP1LP55160 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NCKAP1LP55160 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCKAP1LP55160 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NCKAP1LP55160 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.48■□□□□ 0.39
NCKAP1LP55160 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NCKAP1LP55160 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCKAP1LP55160 BCRP1-201ENST00000444246 691 ntBASIC17.48■□□□□ 0.39
NCKAP1LP55160 UGT1A2P-201ENST00000454886 866 ntBASIC17.48■□□□□ 0.39
NCKAP1LP55160 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.48■□□□□ 0.39
NCKAP1LP55160 AL512638.1-201ENST00000457493 794 ntBASIC17.48■□□□□ 0.39
NCKAP1LP55160 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.48■□□□□ 0.39
NCKAP1LP55160 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.48■□□□□ 0.39
NCKAP1LP55160 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.48■□□□□ 0.39
NCKAP1LP55160 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
NCKAP1LP55160 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.48■□□□□ 0.39
NCKAP1LP55160 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.48■□□□□ 0.39
NCKAP1LP55160 AC008738.7-201ENST00000609744 511 ntBASIC17.48■□□□□ 0.39
NCKAP1LP55160 AC004840.1-201ENST00000636359 365 ntBASIC17.48■□□□□ 0.39
NCKAP1LP55160 AL109936.8-201ENST00000641772 604 ntBASIC17.48■□□□□ 0.39
NCKAP1LP55160 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCKAP1LP55160 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCKAP1LP55160 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.48■□□□□ 0.39
NCKAP1LP55160 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCKAP1LP55160 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.48■□□□□ 0.39
NCKAP1LP55160 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.48■□□□□ 0.39
NCKAP1LP55160 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.48■□□□□ 0.39
NCKAP1LP55160 BTBD7P1-201ENST00000447253 1453 ntBASIC17.48■□□□□ 0.39
NCKAP1LP55160 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.48■□□□□ 0.39
NCKAP1LP55160 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.48■□□□□ 0.39
NCKAP1LP55160 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCKAP1LP55160 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
NCKAP1LP55160 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NCKAP1LP55160 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.47■□□□□ 0.39
NCKAP1LP55160 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
NCKAP1LP55160 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NCKAP1LP55160 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NCKAP1LP55160 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.47■□□□□ 0.39
NCKAP1LP55160 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.47■□□□□ 0.39
NCKAP1LP55160 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NCKAP1LP55160 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms