Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
ZNF140P52738 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF140P52738 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF140P52738 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF140P52738 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF140P52738 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.91■□□□□ 0.14
ZNF140P52738 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF140P52738 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF140P52738 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF140P52738 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF140P52738 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.9■□□□□ 0.14
ZNF140P52738 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF140P52738 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF140P52738 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.9■□□□□ 0.14
ZNF140P52738 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
ZNF140P52738 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF140P52738 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF140P52738 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
ZNF140P52738 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF140P52738 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF140P52738 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
ZNF140P52738 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
ZNF140P52738 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.9■□□□□ 0.14
ZNF140P52738 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
ZNF140P52738 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.9■□□□□ 0.14
ZNF140P52738 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.9■□□□□ 0.14
ZNF140P52738 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF140P52738 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.9■□□□□ 0.14
ZNF140P52738 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.9■□□□□ 0.14
ZNF140P52738 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.9■□□□□ 0.14
ZNF140P52738 GPALPP1-207ENST00000611650 899 ntBASIC15.9■□□□□ 0.14
ZNF140P52738 AL138828.2-201ENST00000615812 383 ntBASIC15.9■□□□□ 0.14
ZNF140P52738 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.9■□□□□ 0.14
ZNF140P52738 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF140P52738 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.9■□□□□ 0.14
ZNF140P52738 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF140P52738 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF140P52738 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF140P52738 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF140P52738 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF140P52738 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF140P52738 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF140P52738 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF140P52738 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.9■□□□□ 0.14
ZNF140P52738 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF140P52738 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF140P52738 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF140P52738 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF140P52738 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
ZNF140P52738 AC092850.2-201ENST00000623821 2697 ntBASIC15.9■□□□□ 0.14
ZNF140P52738 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
ZNF140P52738 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
ZNF140P52738 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.14
ZNF140P52738 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.14
ZNF140P52738 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF140P52738 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF140P52738 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF140P52738 FO538757.1-201ENST00000623083 1397 ntBASIC15.89■□□□□ 0.13
ZNF140P52738 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF140P52738 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF140P52738 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.89■□□□□ 0.13
ZNF140P52738 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.89■□□□□ 0.13
ZNF140P52738 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.89■□□□□ 0.13
ZNF140P52738 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF140P52738 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF140P52738 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF140P52738 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF140P52738 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF140P52738 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
ZNF140P52738 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF140P52738 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF140P52738 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.89■□□□□ 0.13
ZNF140P52738 AC107890.1-201ENST00000422478 521 ntBASIC15.89■□□□□ 0.13
ZNF140P52738 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.89■□□□□ 0.13
ZNF140P52738 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.89■□□□□ 0.13
ZNF140P52738 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF140P52738 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.89■□□□□ 0.13
ZNF140P52738 AC067863.1-201ENST00000494933 530 ntBASIC15.89■□□□□ 0.13
ZNF140P52738 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF140P52738 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.89■□□□□ 0.13
ZNF140P52738 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
ZNF140P52738 AC140878.1-201ENST00000565277 250 ntBASIC15.89■□□□□ 0.13
ZNF140P52738 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.89■□□□□ 0.13
ZNF140P52738 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF140P52738 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.89■□□□□ 0.13
ZNF140P52738 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
ZNF140P52738 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.89■□□□□ 0.13
ZNF140P52738 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF140P52738 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF140P52738 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF140P52738 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
ZNF140P52738 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF140P52738 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.89■□□□□ 0.13
ZNF140P52738 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF140P52738 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF140P52738 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF140P52738 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
ZNF140P52738 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF140P52738 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF140P52738 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms