Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC2P18074 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
ERCC2P18074 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC2P18074 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC2P18074 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC2P18074 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC2P18074 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC2P18074 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.49■□□□□ 0.23
ERCC2P18074 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
ERCC2P18074 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
ERCC2P18074 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.49■□□□□ 0.23
ERCC2P18074 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC2P18074 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.49■□□□□ 0.23
ERCC2P18074 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC2P18074 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC2P18074 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC2P18074 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC2P18074 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.49■□□□□ 0.23
ERCC2P18074 EEF1DP4-201ENST00000446006 880 ntBASIC16.49■□□□□ 0.23
ERCC2P18074 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC2P18074 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.49■□□□□ 0.23
ERCC2P18074 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.49■□□□□ 0.23
ERCC2P18074 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.49■□□□□ 0.23
ERCC2P18074 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC2P18074 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC2P18074 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.49■□□□□ 0.23
ERCC2P18074 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC2P18074 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.49■□□□□ 0.23
ERCC2P18074 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.49■□□□□ 0.23
ERCC2P18074 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.49■□□□□ 0.23
ERCC2P18074 AC093028.1-201ENST00000622998 982 ntBASIC16.49■□□□□ 0.23
ERCC2P18074 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ERCC2P18074 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC2P18074 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC2P18074 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC2P18074 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.49■□□□□ 0.23
ERCC2P18074 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
ERCC2P18074 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ERCC2P18074 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC2P18074 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC2P18074 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.49■□□□□ 0.23
ERCC2P18074 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC2P18074 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC2P18074 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.48■□□□□ 0.23
ERCC2P18074 KRT18P28-201ENST00000453838 1332 ntBASIC16.48■□□□□ 0.23
ERCC2P18074 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC2P18074 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC2P18074 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ERCC2P18074 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC2P18074 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC2P18074 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.48■□□□□ 0.23
ERCC2P18074 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC2P18074 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.48■□□□□ 0.23
ERCC2P18074 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC2P18074 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC2P18074 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.48■□□□□ 0.23
ERCC2P18074 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.48■□□□□ 0.23
ERCC2P18074 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC2P18074 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
ERCC2P18074 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC2P18074 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC2P18074 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.48■□□□□ 0.23
ERCC2P18074 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
ERCC2P18074 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.48■□□□□ 0.23
ERCC2P18074 METTL21AP1-201ENST00000438852 635 ntBASIC16.48■□□□□ 0.23
ERCC2P18074 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.48■□□□□ 0.23
ERCC2P18074 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC2P18074 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC2P18074 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.48■□□□□ 0.23
ERCC2P18074 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.48■□□□□ 0.23
ERCC2P18074 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
ERCC2P18074 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.48■□□□□ 0.23
ERCC2P18074 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.48■□□□□ 0.23
ERCC2P18074 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
ERCC2P18074 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC2P18074 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC2P18074 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC2P18074 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC2P18074 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.48■□□□□ 0.23
ERCC2P18074 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC2P18074 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC2P18074 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC2P18074 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.48■□□□□ 0.23
ERCC2P18074 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC2P18074 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC2P18074 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
ERCC2P18074 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.48■□□□□ 0.23
ERCC2P18074 CICP6-201ENST00000457191 2729 ntBASIC16.47■□□□□ 0.23
ERCC2P18074 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC2P18074 TUBB3P1-201ENST00000405796 1332 ntBASIC16.47■□□□□ 0.23
ERCC2P18074 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC2P18074 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.47■□□□□ 0.23
ERCC2P18074 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.47■□□□□ 0.23
ERCC2P18074 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC2P18074 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC2P18074 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC2P18074 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC2P18074 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC2P18074 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ERCC2P18074 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms