Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 TUBB3P1-201ENST00000405796 1332 ntBASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 HAUS4P1-201ENST00000406739 1145 ntBASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 CRB3P1-201ENST00000449338 276 ntBASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 RNA5SP410-201ENST00000516285 106 ntBASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 AC024267.1-201ENST00000582320 895 ntBASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HERC4Q5GLZ8 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.97■□□□□ 0.47
HERC4Q5GLZ8 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HERC4Q5GLZ8 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HERC4Q5GLZ8 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.97■□□□□ 0.47
HERC4Q5GLZ8 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HERC4Q5GLZ8 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HERC4Q5GLZ8 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.97■□□□□ 0.47
HERC4Q5GLZ8 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
HERC4Q5GLZ8 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.97■□□□□ 0.47
HERC4Q5GLZ8 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HERC4Q5GLZ8 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HERC4Q5GLZ8 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HERC4Q5GLZ8 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.97■□□□□ 0.47
HERC4Q5GLZ8 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.97■□□□□ 0.47
HERC4Q5GLZ8 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.97■□□□□ 0.47
HERC4Q5GLZ8 KLF2P3-201ENST00000451977 1087 ntBASIC17.97■□□□□ 0.47
HERC4Q5GLZ8 AC245100.5-201ENST00000452108 331 ntBASIC17.97■□□□□ 0.47
HERC4Q5GLZ8 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.97■□□□□ 0.47
HERC4Q5GLZ8 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
HERC4Q5GLZ8 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.97■□□□□ 0.47
HERC4Q5GLZ8 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.97■□□□□ 0.47
HERC4Q5GLZ8 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
HERC4Q5GLZ8 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.97■□□□□ 0.47
HERC4Q5GLZ8 AC061975.2-201ENST00000581722 295 ntBASIC17.97■□□□□ 0.47
HERC4Q5GLZ8 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.97■□□□□ 0.47
HERC4Q5GLZ8 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HERC4Q5GLZ8 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HERC4Q5GLZ8 AC069224.1-201ENST00000566372 1715 ntBASIC17.97■□□□□ 0.47
HERC4Q5GLZ8 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
HERC4Q5GLZ8 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HERC4Q5GLZ8 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HERC4Q5GLZ8 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
HERC4Q5GLZ8 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HERC4Q5GLZ8 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.96■□□□□ 0.47
HERC4Q5GLZ8 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HERC4Q5GLZ8 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HERC4Q5GLZ8 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.96■□□□□ 0.47
HERC4Q5GLZ8 AC112504.1-201ENST00000623415 1841 ntBASIC17.96■□□□□ 0.47
HERC4Q5GLZ8 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HERC4Q5GLZ8 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
HERC4Q5GLZ8 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HERC4Q5GLZ8 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HERC4Q5GLZ8 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HERC4Q5GLZ8 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.96■□□□□ 0.47
HERC4Q5GLZ8 FAM220BP-201ENST00000377689 816 ntBASIC17.96■□□□□ 0.47
HERC4Q5GLZ8 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.96■□□□□ 0.47
HERC4Q5GLZ8 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.96■□□□□ 0.47
HERC4Q5GLZ8 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HERC4Q5GLZ8 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
HERC4Q5GLZ8 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.96■□□□□ 0.47
HERC4Q5GLZ8 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.96■□□□□ 0.47
HERC4Q5GLZ8 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.96■□□□□ 0.47
HERC4Q5GLZ8 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HERC4Q5GLZ8 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HERC4Q5GLZ8 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HERC4Q5GLZ8 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HERC4Q5GLZ8 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms