Protein–RNA interactions for Protein: P58499

FAM3B, Protein FAM3B, humanhuman

Predicted RBP Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3BP58499 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM3BP58499 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
FAM3BP58499 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FAM3BP58499 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM3BP58499 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
FAM3BP58499 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
FAM3BP58499 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FAM3BP58499 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FAM3BP58499 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC12.61□□□□□ -0.39
FAM3BP58499 TBC1D3P5-201ENST00000579401 1545 ntBASIC12.61□□□□□ -0.39
FAM3BP58499 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM3BP58499 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
FAM3BP58499 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FAM3BP58499 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FAM3BP58499 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FAM3BP58499 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM3BP58499 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC12.61□□□□□ -0.39
FAM3BP58499 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC12.61□□□□□ -0.39
FAM3BP58499 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM3BP58499 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM3BP58499 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC12.61□□□□□ -0.39
FAM3BP58499 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FAM3BP58499 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.61□□□□□ -0.39
FAM3BP58499 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM3BP58499 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM3BP58499 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC12.61□□□□□ -0.39
FAM3BP58499 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.6□□□□□ -0.39
FAM3BP58499 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FAM3BP58499 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
FAM3BP58499 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
FAM3BP58499 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
FAM3BP58499 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.6□□□□□ -0.39
FAM3BP58499 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
FAM3BP58499 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
FAM3BP58499 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FAM3BP58499 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FAM3BP58499 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FAM3BP58499 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC12.6□□□□□ -0.39
FAM3BP58499 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FAM3BP58499 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FAM3BP58499 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FAM3BP58499 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC12.6□□□□□ -0.39
FAM3BP58499 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FAM3BP58499 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
FAM3BP58499 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
FAM3BP58499 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
FAM3BP58499 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
FAM3BP58499 Z83836.1-201ENST00000624605 1642 ntBASIC12.6□□□□□ -0.39
FAM3BP58499 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
FAM3BP58499 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
FAM3BP58499 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
FAM3BP58499 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.6□□□□□ -0.39
FAM3BP58499 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FAM3BP58499 AC004870.1-201ENST00000315132 882 ntBASIC12.6□□□□□ -0.39
FAM3BP58499 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FAM3BP58499 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
FAM3BP58499 IGHGP-201ENST00000390555 1178 ntBASIC12.6□□□□□ -0.39
FAM3BP58499 PON3-205ENST00000451904 1053 ntTSL 3 BASIC12.6□□□□□ -0.39
FAM3BP58499 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
FAM3BP58499 CIB2-208ENST00000560618 804 ntTSL 2 BASIC12.6□□□□□ -0.39
FAM3BP58499 MIR3180-1-201ENST00000580374 94 ntBASIC12.6□□□□□ -0.39
FAM3BP58499 MIR3180-3-201ENST00000584616 94 ntBASIC12.6□□□□□ -0.39
FAM3BP58499 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC12.6□□□□□ -0.39
FAM3BP58499 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC12.6□□□□□ -0.39
FAM3BP58499 Z69720.1-201ENST00000601483 472 ntBASIC12.6□□□□□ -0.39
FAM3BP58499 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
FAM3BP58499 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC12.6□□□□□ -0.39
FAM3BP58499 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
FAM3BP58499 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FAM3BP58499 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC12.6□□□□□ -0.39
FAM3BP58499 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FAM3BP58499 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FAM3BP58499 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC12.6□□□□□ -0.39
FAM3BP58499 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
FAM3BP58499 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
FAM3BP58499 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.6□□□□□ -0.39
FAM3BP58499 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
FAM3BP58499 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FAM3BP58499 BEND3P1-201ENST00000421591 1944 ntBASIC12.6□□□□□ -0.39
FAM3BP58499 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.6□□□□□ -0.39
FAM3BP58499 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
FAM3BP58499 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FAM3BP58499 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
FAM3BP58499 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
FAM3BP58499 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
FAM3BP58499 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
FAM3BP58499 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
FAM3BP58499 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FAM3BP58499 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC12.6□□□□□ -0.39
FAM3BP58499 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
FAM3BP58499 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM3BP58499 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM3BP58499 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM3BP58499 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
FAM3BP58499 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.59□□□□□ -0.39
FAM3BP58499 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.59□□□□□ -0.39
FAM3BP58499 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM3BP58499 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.59□□□□□ -0.39
FAM3BP58499 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FAM3BP58499 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms