Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC12.91□□□□□ -0.34
APOC3P02656 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC12.91□□□□□ -0.34
APOC3P02656 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
APOC3P02656 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOC3P02656 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC12.91□□□□□ -0.34
APOC3P02656 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC12.91□□□□□ -0.34
APOC3P02656 AL031432.3-201ENST00000607698 485 ntBASIC12.91□□□□□ -0.34
APOC3P02656 PARP1-210ENST00000629232 477 ntTSL 5 BASIC12.91□□□□□ -0.34
APOC3P02656 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC3P02656 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC3P02656 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
APOC3P02656 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC3P02656 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOC3P02656 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC3P02656 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOC3P02656 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOC3P02656 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC3P02656 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOC3P02656 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOC3P02656 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.91□□□□□ -0.34
APOC3P02656 AC097359.2-201ENST00000604992 2389 ntBASIC12.91□□□□□ -0.34
APOC3P02656 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC3P02656 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
APOC3P02656 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC3P02656 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC3P02656 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC3P02656 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
APOC3P02656 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.9□□□□□ -0.34
APOC3P02656 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
APOC3P02656 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.9□□□□□ -0.34
APOC3P02656 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
APOC3P02656 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC3P02656 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
APOC3P02656 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.9□□□□□ -0.34
APOC3P02656 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC3P02656 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC3P02656 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC3P02656 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC3P02656 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC3P02656 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC3P02656 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
APOC3P02656 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC12.9□□□□□ -0.34
APOC3P02656 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC12.9□□□□□ -0.34
APOC3P02656 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC12.9□□□□□ -0.34
APOC3P02656 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC12.9□□□□□ -0.34
APOC3P02656 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC12.9□□□□□ -0.34
APOC3P02656 OR2A1-AS1-207ENST00000486094 819 ntBASIC12.9□□□□□ -0.34
APOC3P02656 SLC29A4P2-201ENST00000504749 1089 ntBASIC12.9□□□□□ -0.34
APOC3P02656 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
APOC3P02656 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC12.9□□□□□ -0.34
APOC3P02656 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC12.9□□□□□ -0.34
APOC3P02656 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC12.9□□□□□ -0.34
APOC3P02656 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC3P02656 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC12.9□□□□□ -0.34
APOC3P02656 AC010240.3-201ENST00000607688 395 ntBASIC12.9□□□□□ -0.34
APOC3P02656 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC12.9□□□□□ -0.34
APOC3P02656 AC112497.1-201ENST00000624824 639 ntBASIC12.9□□□□□ -0.34
APOC3P02656 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC12.9□□□□□ -0.34
APOC3P02656 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC3P02656 AC006277.1-201ENST00000624348 1610 ntBASIC12.9□□□□□ -0.34
APOC3P02656 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
APOC3P02656 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
APOC3P02656 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC3P02656 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
APOC3P02656 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.9□□□□□ -0.34
APOC3P02656 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.9□□□□□ -0.34
APOC3P02656 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
APOC3P02656 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
APOC3P02656 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
APOC3P02656 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
APOC3P02656 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC3P02656 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC3P02656 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
APOC3P02656 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC12.89□□□□□ -0.35
APOC3P02656 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOC3P02656 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOC3P02656 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC3P02656 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
APOC3P02656 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOC3P02656 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC3P02656 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
APOC3P02656 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.89□□□□□ -0.35
APOC3P02656 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC3P02656 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC3P02656 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC3P02656 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC3P02656 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC3P02656 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.89□□□□□ -0.35
APOC3P02656 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC3P02656 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC3P02656 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC3P02656 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOC3P02656 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOC3P02656 AC079776.2-201ENST00000641154 1609 ntBASIC12.89□□□□□ -0.35
APOC3P02656 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
APOC3P02656 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC3P02656 MST1P2-201ENST00000457982 2291 ntBASIC12.89□□□□□ -0.35
APOC3P02656 STX7-201ENST00000367937 1090 ntTSL 5 BASIC12.89□□□□□ -0.35
APOC3P02656 AC007322.1-201ENST00000426983 750 ntBASIC12.89□□□□□ -0.35
APOC3P02656 AC008040.2-201ENST00000461049 708 ntBASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms