RNA–Protein interactions for RNA: ENST00000540251.5

NEK2-205, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-205ENST00000540251 NISCHQ9Y2I1 1504 aa43.99■■■■■ 4.63
NEK2-205ENST00000540251 CCDC180Q9P1Z9 1646 aa38.96■■■■□ 3.83
NEK2-205ENST00000540251 ABCC9O60706 1549 aa37.37■■■■□ 3.57
NEK2-205ENST00000540251 ZCCHC6Q5VYS8 1495 aaKnown RBP36.77■■■■□ 3.48
NEK2-205ENST00000540251 DCAF1Q9Y4B6 1507 aa36.55■■■■□ 3.44
NEK2-205ENST00000540251 MYO15BQ96JP2 1530 aa36.54■■■■□ 3.44
NEK2-205ENST00000540251 NACADO15069 1562 aa36.46■■■■□ 3.43
NEK2-205ENST00000540251 RB1CC1Q8TDY2 1594 aa36.32■■■■□ 3.41
NEK2-205ENST00000540251 DCAF8L2P0C7V8 631 aa36.24■■■■□ 3.39
NEK2-205ENST00000540251 UNC13AQ9UPW8 1703 aa35.58■■■■□ 3.29
NEK2-205ENST00000540251 SCRIBQ14160 1630 aa35.39■■■■□ 3.26
NEK2-205ENST00000540251 BICRAQ9NZM4 1560 aa35.24■■■■□ 3.23
NEK2-205ENST00000540251 SHROOM4Q9ULL8 1493 aa35.01■■■■□ 3.2
NEK2-205ENST00000540251 PABPN1Q86U42 306 aaKnown RBP eCLIP34.96■■■■□ 3.19
NEK2-205ENST00000540251 EIF4G1Q04637 1599 aaKnown RBP34.22■■■■□ 3.07
NEK2-205ENST00000540251 CECR2Q9BXF3 1484 aa34.14■■■■□ 3.06
NEK2-205ENST00000540251 BAZ1AQ9NRL2 1556 aaPredicted RBP34.06■■■■□ 3.04
NEK2-205ENST00000540251 SMARCA4P51532 1647 aa34.01■■■■□ 3.04
NEK2-205ENST00000540251 CC2D2AQ9P2K1 1620 aa33.93■■■■□ 3.02
NEK2-205ENST00000540251 MROH2BQ7Z745 1585 aa33.86■■■■□ 3.01
NEK2-205ENST00000540251 DNAJC5BQ9UF47 199 aa33.85■■■■□ 3.01
NEK2-205ENST00000540251 PEG3Q9GZU2 1588 aa33.78■■■■□ 3
NEK2-205ENST00000540251 SMARCA2P51531 1590 aa33.69■■■□□ 2.98
NEK2-205ENST00000540251 RSF1Q96T23 1441 aaPredicted RBP33.68■■■□□ 2.98
NEK2-205ENST00000540251 ATAD2BQ9ULI0 1458 aa33.68■■■□□ 2.98
NEK2-205ENST00000540251 NCAPD3P42695 1498 aa33.65■■■□□ 2.98
NEK2-205ENST00000540251 WIZO95785 1651 aa33.53■■■□□ 2.96
NEK2-205ENST00000540251 HMGXB3Q12766 1538 aa33.52■■■□□ 2.96
NEK2-205ENST00000540251 BAZ1BQ9UIG0 1483 aaKnown RBP33.38■■■□□ 2.93
NEK2-205ENST00000540251 TOP2AP11388 1531 aaKnown RBP33.23■■■□□ 2.91
NEK2-205ENST00000540251 SUPT5HO00267 1087 aaKnown RBP33.02■■■□□ 2.88
NEK2-205ENST00000540251 CCDC88BA6NC98 1476 aa32.81■■■□□ 2.84
NEK2-205ENST00000540251 LAMC3Q9Y6N6 1575 aa32.66■■■□□ 2.82
NEK2-205ENST00000540251 CADPSQ9ULU8 1353 aa32.63■■■□□ 2.81
NEK2-205ENST00000540251 CFTRP13569 1480 aa32.58■■■□□ 2.81
NEK2-205ENST00000540251 NESP48681 1621 aa32.53■■■□□ 2.8
NEK2-205ENST00000540251 PRDM2Q13029 1718 aa32.46■■■□□ 2.79
NEK2-205ENST00000540251 PDS5BQ9NTI5 1447 aa32.36■■■□□ 2.77
NEK2-205ENST00000540251 KIF21AQ7Z4S6 1674 aa32.23■■■□□ 2.75
NEK2-205ENST00000540251 FANCD2Q9BXW9 1451 aa32.22■■■□□ 2.75
NEK2-205ENST00000540251 ERCC6Q03468 1493 aa32.15■■■□□ 2.74
NEK2-205ENST00000540251 CEP164Q9UPV0 1460 aa32.12■■■□□ 2.73
NEK2-205ENST00000540251 THOC2Q8NI27 1593 aaKnown RBP32.02■■■□□ 2.72
NEK2-205ENST00000540251 MRC2Q9UBG0 1479 aa31.97■■■□□ 2.71
NEK2-205ENST00000540251 WDR62O43379 1518 aa31.91■■■□□ 2.7
NEK2-205ENST00000540251 ABCC8Q09428 1581 aa31.89■■■□□ 2.7
NEK2-205ENST00000540251 URB2Q14146 1524 aaKnown RBP31.87■■■□□ 2.69
NEK2-205ENST00000540251 DNMBPQ6XZF7 1577 aa31.82■■■□□ 2.68
NEK2-205ENST00000540251 TOPBP1Q92547 1522 aa31.79■■■□□ 2.68
NEK2-205ENST00000540251 CUX2O14529 1486 aa31.77■■■□□ 2.68
NEK2-205ENST00000540251 CUX1P39880 1505 aa31.74■■■□□ 2.67
NEK2-205ENST00000540251 WRNQ14191 1432 aaPredicted RBP eCLIP31.71■■■□□ 2.67
NEK2-205ENST00000540251 BIVM-ERCC5R4GMW8 1640 aa31.68■■■□□ 2.66
NEK2-205ENST00000540251 TOP2BQ02880 1626 aa31.67■■■□□ 2.66
NEK2-205ENST00000540251 SYNJ1O43426 1573 aa31.61■■■□□ 2.65
NEK2-205ENST00000540251 POLA1P09884 1462 aaPredicted RBP31.54■■■□□ 2.64
NEK2-205ENST00000540251 FGD5Q6ZNL6 1462 aa31.52■■■□□ 2.64
NEK2-205ENST00000540251 IFT140Q96RY7 1462 aa31.46■■■□□ 2.63
NEK2-205ENST00000540251 TARBP1Q13395 1621 aaKnown RBP31.45■■■□□ 2.63
NEK2-205ENST00000540251 SOGA1O94964 1423 aa31.4■■■□□ 2.62
NEK2-205ENST00000540251 WDR97A6NE52 1622 aa31.34■■■□□ 2.61
NEK2-205ENST00000540251 RAD54L2Q9Y4B4 1467 aa31.33■■■□□ 2.61
NEK2-205ENST00000540251 ABCA10Q8WWZ4 1543 aa31.32■■■□□ 2.6
NEK2-205ENST00000540251 CHIC1Q5VXU3 224 aa31.27■■■□□ 2.6
NEK2-205ENST00000540251 TRIM41Q8WV44 630 aa31.24■■■□□ 2.59
NEK2-205ENST00000540251 ZNF608Q9ULD9 1512 aaPredicted RBP31.22■■■□□ 2.59
NEK2-205ENST00000540251 ABCA5Q8WWZ7 1642 aa31.15■■■□□ 2.58
NEK2-205ENST00000540251 EIF4G3O43432 1585 aaKnown RBP31.15■■■□□ 2.58
NEK2-205ENST00000540251 TDRD9Q8NDG6 1382 aaKnown RBP31.1■■■□□ 2.57
NEK2-205ENST00000540251 AQRO60306 1485 aaKnown RBP eCLIP31.09■■■□□ 2.572e-6■■■□□ 15.6
NEK2-205ENST00000540251 GAPVD1Q14C86 1478 aa31.06■■■□□ 2.56
NEK2-205ENST00000540251 KIF27Q86VH2 1401 aa31.01■■■□□ 2.56
NEK2-205ENST00000540251 GRIN2BQ13224 1484 aa31■■■□□ 2.55
NEK2-205ENST00000540251 PBRM1Q86U86 1689 aa31■■■□□ 2.55
NEK2-205ENST00000540251 ERICH3Q5RHP9 1530 aa30.97■■■□□ 2.55
NEK2-205ENST00000540251 MAGI1Q96QZ7 1491 aaPredicted RBP30.89■■■□□ 2.54
NEK2-205ENST00000540251 EEA1Q15075 1411 aa30.86■■■□□ 2.53
NEK2-205ENST00000540251 IGF1RP08069 1367 aa30.86■■■□□ 2.53
NEK2-205ENST00000540251 RUSC2Q8N2Y8 1516 aa30.85■■■□□ 2.53
NEK2-205ENST00000540251 SNAPC4Q5SXM2 1469 aa30.83■■■□□ 2.53
NEK2-205ENST00000540251 CUL7Q14999 1698 aa30.79■■■□□ 2.52
NEK2-205ENST00000540251 ADAMTS12P58397 1594 aa30.77■■■□□ 2.52
NEK2-205ENST00000540251 FHAD1B1AJZ9 1412 aa30.75■■■□□ 2.51
NEK2-205ENST00000540251 SYNJ2O15056 1496 aa30.74■■■□□ 2.51
NEK2-205ENST00000540251 CHD1O14646 1710 aa30.68■■■□□ 2.5
NEK2-205ENST00000540251 CSRNP3Q8WYN3 585 aa30.65■■■□□ 2.5
NEK2-205ENST00000540251 CARMIL1Q5VZK9 1371 aa30.64■■■□□ 2.5
NEK2-205ENST00000540251 PRXQ9BXM0 1461 aa30.62■■■□□ 2.49
NEK2-205ENST00000540251 GRIN2AQ12879 1464 aa30.59■■■□□ 2.49
NEK2-205ENST00000540251 CHMP7Q8WUX9 453 aaPredicted RBP30.58■■■□□ 2.49
NEK2-205ENST00000540251 RAPGEF2Q9Y4G8 1499 aa30.54■■■□□ 2.48
NEK2-205ENST00000540251 NUP160Q12769 1436 aa30.49■■■□□ 2.47
NEK2-205ENST00000540251 FBLN2P98095 1184 aa30.48■■■□□ 2.47
NEK2-205ENST00000540251 OSCARQ8IYS5 282 aa30.48■■■□□ 2.47
NEK2-205ENST00000540251 KIF21BO75037 1637 aa30.48■■■□□ 2.47
NEK2-205ENST00000540251 FAM9AQ8IZU1 332 aaPredicted RBP30.45■■■□□ 2.46
NEK2-205ENST00000540251 CEP170Q5SW79 1584 aa30.42■■■□□ 2.46
NEK2-205ENST00000540251 CLASP1Q7Z460 1538 aa30.39■■■□□ 2.46
NEK2-205ENST00000540251 KIAA0586Q9BVV6 1533 aa30.31■■■□□ 2.44
NEK2-205ENST00000540251 CTTNBP2Q8WZ74 1663 aa30.27■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms