Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SRRM4A7MD48 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SRRM4A7MD48 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SRRM4A7MD48 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC12.96□□□□□ -0.34
SRRM4A7MD48 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
SRRM4A7MD48 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
SRRM4A7MD48 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC12.96□□□□□ -0.34
SRRM4A7MD48 DBET-201ENST00000630918 3363 ntBASIC12.96□□□□□ -0.34
SRRM4A7MD48 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SRRM4A7MD48 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC12.96□□□□□ -0.34
SRRM4A7MD48 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC12.96□□□□□ -0.34
SRRM4A7MD48 AC013268.4-201ENST00000637413 2228 ntBASIC12.96□□□□□ -0.34
SRRM4A7MD48 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
SRRM4A7MD48 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SRRM4A7MD48 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC12.96□□□□□ -0.34
SRRM4A7MD48 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SRRM4A7MD48 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC12.96□□□□□ -0.34
SRRM4A7MD48 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SRRM4A7MD48 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC12.95□□□□□ -0.34
SRRM4A7MD48 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SRRM4A7MD48 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SRRM4A7MD48 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SRRM4A7MD48 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC12.95□□□□□ -0.34
SRRM4A7MD48 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC12.95□□□□□ -0.34
SRRM4A7MD48 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SRRM4A7MD48 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC12.95□□□□□ -0.34
SRRM4A7MD48 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SRRM4A7MD48 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC12.95□□□□□ -0.34
SRRM4A7MD48 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SRRM4A7MD48 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC12.95□□□□□ -0.34
SRRM4A7MD48 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SRRM4A7MD48 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SRRM4A7MD48 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SRRM4A7MD48 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC12.95□□□□□ -0.34
SRRM4A7MD48 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SRRM4A7MD48 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SRRM4A7MD48 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC12.95□□□□□ -0.34
SRRM4A7MD48 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.95□□□□□ -0.34
SRRM4A7MD48 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC12.95□□□□□ -0.34
SRRM4A7MD48 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC12.95□□□□□ -0.34
SRRM4A7MD48 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SRRM4A7MD48 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SRRM4A7MD48 MIR346-201ENST00000362234 95 ntBASIC12.95□□□□□ -0.34
SRRM4A7MD48 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SRRM4A7MD48 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SRRM4A7MD48 SPCS2P4-201ENST00000436160 681 ntBASIC12.95□□□□□ -0.34
SRRM4A7MD48 MDH2-205ENST00000461263 648 ntTSL 2 BASIC12.95□□□□□ -0.34
SRRM4A7MD48 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC12.95□□□□□ -0.34
SRRM4A7MD48 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC12.95□□□□□ -0.34
SRRM4A7MD48 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC12.95□□□□□ -0.34
SRRM4A7MD48 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC12.95□□□□□ -0.34
SRRM4A7MD48 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC12.95□□□□□ -0.34
SRRM4A7MD48 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SRRM4A7MD48 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.95□□□□□ -0.34
SRRM4A7MD48 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC12.95□□□□□ -0.34
SRRM4A7MD48 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SRRM4A7MD48 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC12.95□□□□□ -0.34
SRRM4A7MD48 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SRRM4A7MD48 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC12.95□□□□□ -0.34
SRRM4A7MD48 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC12.95□□□□□ -0.34
SRRM4A7MD48 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SRRM4A7MD48 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SRRM4A7MD48 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SRRM4A7MD48 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.95□□□□□ -0.34
SRRM4A7MD48 AL691432.1-201ENST00000596308 1422 ntBASIC12.95□□□□□ -0.34
SRRM4A7MD48 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SRRM4A7MD48 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SRRM4A7MD48 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
SRRM4A7MD48 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC12.95□□□□□ -0.34
SRRM4A7MD48 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SRRM4A7MD48 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.95□□□□□ -0.34
SRRM4A7MD48 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SRRM4A7MD48 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SRRM4A7MD48 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SRRM4A7MD48 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SRRM4A7MD48 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SRRM4A7MD48 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SRRM4A7MD48 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SRRM4A7MD48 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC12.94□□□□□ -0.34
SRRM4A7MD48 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SRRM4A7MD48 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SRRM4A7MD48 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC12.94□□□□□ -0.34
SRRM4A7MD48 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SRRM4A7MD48 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC12.94□□□□□ -0.34
SRRM4A7MD48 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SRRM4A7MD48 AC136621.1-201ENST00000624017 2304 ntBASIC12.94□□□□□ -0.34
SRRM4A7MD48 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SRRM4A7MD48 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
SRRM4A7MD48 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SRRM4A7MD48 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
SRRM4A7MD48 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SRRM4A7MD48 AC018892.3-201ENST00000623986 2499 ntBASIC12.94□□□□□ -0.34
SRRM4A7MD48 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.94□□□□□ -0.34
SRRM4A7MD48 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SRRM4A7MD48 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC12.94□□□□□ -0.34
SRRM4A7MD48 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SRRM4A7MD48 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SRRM4A7MD48 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SRRM4A7MD48 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC12.94□□□□□ -0.34
SRRM4A7MD48 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms