Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.28■□□□□ 0.2
LGSNQ5TDP6 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LGSNQ5TDP6 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
LGSNQ5TDP6 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LGSNQ5TDP6 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
LGSNQ5TDP6 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
LGSNQ5TDP6 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.27■□□□□ 0.2
LGSNQ5TDP6 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.27■□□□□ 0.2
LGSNQ5TDP6 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LGSNQ5TDP6 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LGSNQ5TDP6 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LGSNQ5TDP6 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.27■□□□□ 0.2
LGSNQ5TDP6 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LGSNQ5TDP6 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LGSNQ5TDP6 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LGSNQ5TDP6 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LGSNQ5TDP6 RPS2P28-201ENST00000314255 741 ntBASIC16.27■□□□□ 0.2
LGSNQ5TDP6 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
LGSNQ5TDP6 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LGSNQ5TDP6 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LGSNQ5TDP6 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.27■□□□□ 0.2
LGSNQ5TDP6 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LGSNQ5TDP6 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.27■□□□□ 0.2
LGSNQ5TDP6 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.27■□□□□ 0.2
LGSNQ5TDP6 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.27■□□□□ 0.2
LGSNQ5TDP6 ACTL9-202ENST00000612068 1252 ntBASIC16.27■□□□□ 0.2
LGSNQ5TDP6 AC004790.2-201ENST00000623588 572 ntBASIC16.27■□□□□ 0.2
LGSNQ5TDP6 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LGSNQ5TDP6 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LGSNQ5TDP6 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LGSNQ5TDP6 AC092850.2-201ENST00000623821 2697 ntBASIC16.27■□□□□ 0.19
LGSNQ5TDP6 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LGSNQ5TDP6 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LGSNQ5TDP6 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LGSNQ5TDP6 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.27■□□□□ 0.19
LGSNQ5TDP6 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.27■□□□□ 0.19
LGSNQ5TDP6 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LGSNQ5TDP6 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LGSNQ5TDP6 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
LGSNQ5TDP6 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 AKR1C7P-201ENST00000305623 895 ntBASIC16.26■□□□□ 0.19
LGSNQ5TDP6 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 KRT18P34-201ENST00000488218 1270 ntBASIC16.26■□□□□ 0.19
LGSNQ5TDP6 RNPS1P1-201ENST00000507437 918 ntBASIC16.26■□□□□ 0.19
LGSNQ5TDP6 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.26■□□□□ 0.19
LGSNQ5TDP6 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LGSNQ5TDP6 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LGSNQ5TDP6 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LGSNQ5TDP6 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LGSNQ5TDP6 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LGSNQ5TDP6 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LGSNQ5TDP6 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.25■□□□□ 0.19
LGSNQ5TDP6 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LGSNQ5TDP6 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LGSNQ5TDP6 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LGSNQ5TDP6 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LGSNQ5TDP6 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LGSNQ5TDP6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.25■□□□□ 0.19
LGSNQ5TDP6 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.25■□□□□ 0.19
LGSNQ5TDP6 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.25■□□□□ 0.19
LGSNQ5TDP6 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.25■□□□□ 0.19
LGSNQ5TDP6 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.25■□□□□ 0.19
LGSNQ5TDP6 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms