Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
CXCL5P42830 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
CXCL5P42830 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
CXCL5P42830 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC10.93□□□□□ -0.66
CXCL5P42830 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
CXCL5P42830 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CXCL5P42830 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CXCL5P42830 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
CXCL5P42830 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CXCL5P42830 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC10.92□□□□□ -0.66
CXCL5P42830 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
CXCL5P42830 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
CXCL5P42830 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
CXCL5P42830 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CXCL5P42830 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC10.92□□□□□ -0.66
CXCL5P42830 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CXCL5P42830 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
CXCL5P42830 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
CXCL5P42830 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CXCL5P42830 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CXCL5P42830 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC10.92□□□□□ -0.66
CXCL5P42830 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC10.92□□□□□ -0.66
CXCL5P42830 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CXCL5P42830 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
CXCL5P42830 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CXCL5P42830 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CXCL5P42830 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
CXCL5P42830 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC10.92□□□□□ -0.66
CXCL5P42830 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
CXCL5P42830 PNN-202ENST00000553331 656 ntTSL 3 BASIC10.92□□□□□ -0.66
CXCL5P42830 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC10.92□□□□□ -0.66
CXCL5P42830 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CXCL5P42830 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
CXCL5P42830 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
CXCL5P42830 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC10.92□□□□□ -0.66
CXCL5P42830 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC10.92□□□□□ -0.66
CXCL5P42830 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC10.92□□□□□ -0.66
CXCL5P42830 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC10.92□□□□□ -0.66
CXCL5P42830 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC10.92□□□□□ -0.66
CXCL5P42830 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CXCL5P42830 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CXCL5P42830 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CXCL5P42830 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CXCL5P42830 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC10.92□□□□□ -0.66
CXCL5P42830 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CXCL5P42830 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CXCL5P42830 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CXCL5P42830 SLC22A20-204ENST00000530038 1673 ntBASIC10.92□□□□□ -0.66
CXCL5P42830 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
CXCL5P42830 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CXCL5P42830 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC10.91□□□□□ -0.66
CXCL5P42830 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC10.91□□□□□ -0.66
CXCL5P42830 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC10.91□□□□□ -0.66
CXCL5P42830 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC10.91□□□□□ -0.66
CXCL5P42830 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
CXCL5P42830 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
CXCL5P42830 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC10.91□□□□□ -0.66
CXCL5P42830 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
CXCL5P42830 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC10.91□□□□□ -0.66
CXCL5P42830 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CXCL5P42830 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
CXCL5P42830 AC007292.2-201ENST00000593524 1812 ntBASIC10.91□□□□□ -0.66
CXCL5P42830 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
CXCL5P42830 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC10.91□□□□□ -0.66
CXCL5P42830 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC10.91□□□□□ -0.66
CXCL5P42830 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CXCL5P42830 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
CXCL5P42830 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC10.91□□□□□ -0.66
CXCL5P42830 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
CXCL5P42830 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
CXCL5P42830 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CXCL5P42830 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC10.91□□□□□ -0.66
CXCL5P42830 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CXCL5P42830 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CXCL5P42830 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CXCL5P42830 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CXCL5P42830 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CXCL5P42830 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CXCL5P42830 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC10.91□□□□□ -0.66
CXCL5P42830 PMS2P1-201ENST00000431037 1228 ntBASIC10.91□□□□□ -0.66
CXCL5P42830 AC132008.2-207ENST00000454517 770 ntBASIC10.91□□□□□ -0.66
CXCL5P42830 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CXCL5P42830 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC10.91□□□□□ -0.66
CXCL5P42830 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC10.91□□□□□ -0.66
CXCL5P42830 AL160237.2-201ENST00000556165 472 ntBASIC10.91□□□□□ -0.66
CXCL5P42830 MPI-205ENST00000562606 1052 ntTSL 3 BASIC10.91□□□□□ -0.66
CXCL5P42830 NME3-204ENST00000563498 920 ntTSL 2 BASIC10.91□□□□□ -0.66
CXCL5P42830 AC021097.1-201ENST00000607902 574 ntBASIC10.91□□□□□ -0.66
CXCL5P42830 WT1-AS_2.1-201ENST00000613208 137 ntBASIC10.91□□□□□ -0.66
CXCL5P42830 BCL10-202ENST00000620248 774 ntTSL 5 BASIC10.91□□□□□ -0.66
CXCL5P42830 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CXCL5P42830 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CXCL5P42830 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC10.91□□□□□ -0.66
CXCL5P42830 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CXCL5P42830 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CXCL5P42830 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CXCL5P42830 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC10.91□□□□□ -0.66
CXCL5P42830 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
CXCL5P42830 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC10.91□□□□□ -0.66
CXCL5P42830 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms