Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CXCL5P42830 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CXCL5P42830 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC22.11■■□□□ 1.13
CXCL5P42830 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
CXCL5P42830 HES6-203ENST00000409160 1600 ntTSL 2 BASIC21.9■■□□□ 1.1
CXCL5P42830 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
CXCL5P42830 AL356512.1-201ENST00000607453 1739 ntBASIC21.7■■□□□ 1.06
CXCL5P42830 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC21.57■■□□□ 1.04
CXCL5P42830 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CXCL5P42830 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CXCL5P42830 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC21.39■■□□□ 1.01
CXCL5P42830 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CXCL5P42830 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CXCL5P42830 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC21.19■□□□□ 0.98
CXCL5P42830 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CXCL5P42830 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
CXCL5P42830 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
CXCL5P42830 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CXCL5P42830 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CXCL5P42830 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CXCL5P42830 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CXCL5P42830 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC20.86■□□□□ 0.93
CXCL5P42830 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CXCL5P42830 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CXCL5P42830 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CXCL5P42830 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CXCL5P42830 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CXCL5P42830 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CXCL5P42830 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CXCL5P42830 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CXCL5P42830 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CXCL5P42830 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CXCL5P42830 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC20.35■□□□□ 0.85
CXCL5P42830 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CXCL5P42830 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CXCL5P42830 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC20.26■□□□□ 0.83
CXCL5P42830 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC20.21■□□□□ 0.83
CXCL5P42830 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
CXCL5P42830 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CXCL5P42830 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CXCL5P42830 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CXCL5P42830 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CXCL5P42830 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CXCL5P42830 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CXCL5P42830 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CXCL5P42830 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CXCL5P42830 ILK-212ENST00000532063 1617 ntTSL 2 BASIC19.95■□□□□ 0.78
CXCL5P42830 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CXCL5P42830 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CXCL5P42830 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CXCL5P42830 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC19.92■□□□□ 0.78
CXCL5P42830 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CXCL5P42830 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC19.9■□□□□ 0.78
CXCL5P42830 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CXCL5P42830 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CXCL5P42830 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CXCL5P42830 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CXCL5P42830 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
CXCL5P42830 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CXCL5P42830 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CXCL5P42830 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CXCL5P42830 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC19.71■□□□□ 0.75
CXCL5P42830 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CXCL5P42830 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CXCL5P42830 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CXCL5P42830 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CXCL5P42830 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CXCL5P42830 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CXCL5P42830 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC19.64■□□□□ 0.73
CXCL5P42830 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CXCL5P42830 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CXCL5P42830 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CXCL5P42830 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CXCL5P42830 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC19.54■□□□□ 0.72
CXCL5P42830 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CXCL5P42830 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CXCL5P42830 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CXCL5P42830 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CXCL5P42830 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CXCL5P42830 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CXCL5P42830 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CXCL5P42830 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CXCL5P42830 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC19.47■□□□□ 0.71
CXCL5P42830 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC19.46■□□□□ 0.71
CXCL5P42830 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC19.45■□□□□ 0.7
CXCL5P42830 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CXCL5P42830 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CXCL5P42830 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CXCL5P42830 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CXCL5P42830 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CXCL5P42830 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CXCL5P42830 AC145285.7-201ENST00000614819 1539 ntBASIC19.32■□□□□ 0.68
CXCL5P42830 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CXCL5P42830 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CXCL5P42830 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CXCL5P42830 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CXCL5P42830 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
CXCL5P42830 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
CXCL5P42830 ST7-202ENST00000323984 2142 ntTSL 5 BASIC19.27■□□□□ 0.67
CXCL5P42830 ST7-207ENST00000393449 2127 ntTSL 5 BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms