Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
UPK2O00526 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC12.94□□□□□ -0.34
UPK2O00526 AP002472.1-201ENST00000577490 586 ntBASIC12.94□□□□□ -0.34
UPK2O00526 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC12.94□□□□□ -0.34
UPK2O00526 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC12.94□□□□□ -0.34
UPK2O00526 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UPK2O00526 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK2O00526 AC013268.4-201ENST00000637413 2228 ntBASIC12.94□□□□□ -0.34
UPK2O00526 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
UPK2O00526 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK2O00526 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK2O00526 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC12.94□□□□□ -0.34
UPK2O00526 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK2O00526 PPT1-215ENST00000641471 2368 ntBASIC12.94□□□□□ -0.34
UPK2O00526 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK2O00526 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK2O00526 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK2O00526 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UPK2O00526 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK2O00526 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK2O00526 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC12.93□□□□□ -0.34
UPK2O00526 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC12.93□□□□□ -0.34
UPK2O00526 TMBIM7P-203ENST00000641617 1718 ntBASIC12.93□□□□□ -0.34
UPK2O00526 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC12.93□□□□□ -0.34
UPK2O00526 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC12.93□□□□□ -0.34
UPK2O00526 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC12.93□□□□□ -0.34
UPK2O00526 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK2O00526 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
UPK2O00526 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK2O00526 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK2O00526 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UPK2O00526 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC12.93□□□□□ -0.34
UPK2O00526 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
UPK2O00526 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK2O00526 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK2O00526 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC12.93□□□□□ -0.34
UPK2O00526 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UPK2O00526 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK2O00526 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK2O00526 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK2O00526 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK2O00526 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK2O00526 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK2O00526 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK2O00526 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC12.93□□□□□ -0.34
UPK2O00526 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC12.93□□□□□ -0.34
UPK2O00526 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UPK2O00526 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC12.93□□□□□ -0.34
UPK2O00526 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC12.93□□□□□ -0.34
UPK2O00526 AC098859.1-201ENST00000502915 1238 ntBASIC12.93□□□□□ -0.34
UPK2O00526 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC12.93□□□□□ -0.34
UPK2O00526 AC112191.1-201ENST00000523689 701 ntBASIC12.93□□□□□ -0.34
UPK2O00526 PDPK2P-202ENST00000562415 1191 ntBASIC12.93□□□□□ -0.34
UPK2O00526 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC12.93□□□□□ -0.34
UPK2O00526 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC12.93□□□□□ -0.34
UPK2O00526 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC12.93□□□□□ -0.34
UPK2O00526 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
UPK2O00526 SSR4P1-203ENST00000599569 2260 ntBASIC12.93□□□□□ -0.34
UPK2O00526 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC12.93□□□□□ -0.34
UPK2O00526 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC12.93□□□□□ -0.34
UPK2O00526 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK2O00526 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UPK2O00526 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
UPK2O00526 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK2O00526 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC12.93□□□□□ -0.34
UPK2O00526 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC12.93□□□□□ -0.34
UPK2O00526 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC12.93□□□□□ -0.34
UPK2O00526 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC12.93□□□□□ -0.34
UPK2O00526 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK2O00526 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UPK2O00526 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
UPK2O00526 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UPK2O00526 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
UPK2O00526 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UPK2O00526 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UPK2O00526 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UPK2O00526 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK2O00526 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK2O00526 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
UPK2O00526 AC134407.2-201ENST00000625089 1978 ntBASIC12.92□□□□□ -0.34
UPK2O00526 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK2O00526 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
UPK2O00526 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK2O00526 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK2O00526 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
UPK2O00526 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK2O00526 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK2O00526 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
UPK2O00526 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
UPK2O00526 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK2O00526 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.92□□□□□ -0.34
UPK2O00526 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.92□□□□□ -0.34
UPK2O00526 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
UPK2O00526 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
UPK2O00526 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
UPK2O00526 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK2O00526 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK2O00526 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK2O00526 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
UPK2O00526 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms