Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 CETN4P-206ENST00000642099 2168 ntBASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 TSSK5P-201ENST00000423978 907 ntBASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMX2-CTNND1H3BSU7 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 SPDYE22P-201ENST00000582158 798 ntBASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 SPDYE12P-201ENST00000618416 771 ntBASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 AC025048.6-201ENST00000634326 1161 ntBASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
TMX2-CTNND1H3BSU7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.83■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms