Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC187A0A096LP49 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 CROCCP1-201ENST00000426910 5675 ntBASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 RPL13AP25-201ENST00000484130 612 ntBASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 ENPP7P5-201ENST00000541031 1031 ntBASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC187A0A096LP49 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 PTP4A1P2-201ENST00000546033 454 ntBASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 AL359711.2-201ENST00000563105 872 ntBASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 MIR4538-201ENST00000581377 78 ntBASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 AL133338.1-201ENST00000565695 1517 ntBASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC187A0A096LP49 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms