Protein–RNA interactions for Protein: Q8WW12

PCNP, PEST proteolytic signal-containing nuclear protein, humanhuman

Known RBP Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNPQ8WW12 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCNPQ8WW12 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCNPQ8WW12 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCNPQ8WW12 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCNPQ8WW12 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PCNPQ8WW12 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
PCNPQ8WW12 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
PCNPQ8WW12 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCNPQ8WW12 AC012618.2-201ENST00000428058 849 ntBASIC13.39□□□□□ -0.27
PCNPQ8WW12 AC098590.1-201ENST00000468126 897 ntBASIC13.39□□□□□ -0.27
PCNPQ8WW12 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PCNPQ8WW12 AC112698.1-201ENST00000510299 916 ntBASIC13.39□□□□□ -0.27
PCNPQ8WW12 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PCNPQ8WW12 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC13.39□□□□□ -0.27
PCNPQ8WW12 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
PCNPQ8WW12 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
PCNPQ8WW12 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCNPQ8WW12 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
PCNPQ8WW12 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCNPQ8WW12 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PCNPQ8WW12 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
PCNPQ8WW12 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCNPQ8WW12 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PCNPQ8WW12 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC13.39□□□□□ -0.27
PCNPQ8WW12 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC13.39□□□□□ -0.27
PCNPQ8WW12 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
PCNPQ8WW12 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.39□□□□□ -0.27
PCNPQ8WW12 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCNPQ8WW12 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCNPQ8WW12 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCNPQ8WW12 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCNPQ8WW12 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCNPQ8WW12 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCNPQ8WW12 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCNPQ8WW12 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCNPQ8WW12 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.39□□□□□ -0.27
PCNPQ8WW12 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.39□□□□□ -0.27
PCNPQ8WW12 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.39□□□□□ -0.27
PCNPQ8WW12 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC13.39□□□□□ -0.27
PCNPQ8WW12 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCNPQ8WW12 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PCNPQ8WW12 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PCNPQ8WW12 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PCNPQ8WW12 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.38□□□□□ -0.27
PCNPQ8WW12 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
PCNPQ8WW12 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PCNPQ8WW12 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCNPQ8WW12 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
PCNPQ8WW12 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCNPQ8WW12 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
PCNPQ8WW12 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCNPQ8WW12 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.38□□□□□ -0.27
PCNPQ8WW12 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PCNPQ8WW12 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCNPQ8WW12 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCNPQ8WW12 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCNPQ8WW12 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCNPQ8WW12 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.38□□□□□ -0.27
PCNPQ8WW12 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PCNPQ8WW12 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCNPQ8WW12 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCNPQ8WW12 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCNPQ8WW12 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC13.38□□□□□ -0.27
PCNPQ8WW12 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCNPQ8WW12 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PCNPQ8WW12 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCNPQ8WW12 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCNPQ8WW12 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC13.38□□□□□ -0.27
PCNPQ8WW12 FAM197Y1-201ENST00000421178 764 ntBASIC13.38□□□□□ -0.27
PCNPQ8WW12 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PCNPQ8WW12 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PCNPQ8WW12 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC13.38□□□□□ -0.27
PCNPQ8WW12 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
PCNPQ8WW12 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC13.38□□□□□ -0.27
PCNPQ8WW12 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC13.38□□□□□ -0.27
PCNPQ8WW12 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC13.38□□□□□ -0.27
PCNPQ8WW12 CD177P1-201ENST00000606252 935 ntBASIC13.38□□□□□ -0.27
PCNPQ8WW12 CR769767.2-201ENST00000622735 460 ntBASIC13.38□□□□□ -0.27
PCNPQ8WW12 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PCNPQ8WW12 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
PCNPQ8WW12 AC090616.6-203ENST00000579186 1945 ntBASIC13.38□□□□□ -0.27
PCNPQ8WW12 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCNPQ8WW12 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCNPQ8WW12 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.38□□□□□ -0.27
PCNPQ8WW12 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
PCNPQ8WW12 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCNPQ8WW12 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCNPQ8WW12 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
PCNPQ8WW12 MME-217ENST00000616757 1315 ntTSL 5 BASIC13.38□□□□□ -0.27
PCNPQ8WW12 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCNPQ8WW12 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PCNPQ8WW12 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCNPQ8WW12 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCNPQ8WW12 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCNPQ8WW12 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCNPQ8WW12 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCNPQ8WW12 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PCNPQ8WW12 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PCNPQ8WW12 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCNPQ8WW12 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms