RNA–Protein interactions for RNA: ENST00000252826.9

TRPM4-201, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPM4, Length 4,109 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-201ENST00000252826 NISCHQ9Y2I1 1504 aa27.11■■□□□ 1.93
TRPM4-201ENST00000252826 DCAF8L2P0C7V8 631 aa24.66■■□□□ 1.54
TRPM4-201ENST00000252826 SHROOM4Q9ULL8 1493 aa23.66■■□□□ 1.38
TRPM4-201ENST00000252826 ABCC9O60706 1549 aa23.14■■□□□ 1.3
TRPM4-201ENST00000252826 SUPT5HO00267 1087 aaKnown RBP23.11■■□□□ 1.29
TRPM4-201ENST00000252826 CCDC180Q9P1Z9 1646 aa23.01■■□□□ 1.27
TRPM4-201ENST00000252826 ZCCHC6Q5VYS8 1495 aaKnown RBP22.58■■□□□ 1.21
TRPM4-201ENST00000252826 PABPN1Q86U42 306 aaKnown RBP eCLIP22.32■■□□□ 1.16
TRPM4-201ENST00000252826 SCRIBQ14160 1630 aa22.1■■□□□ 1.13
TRPM4-201ENST00000252826 PELP1Q8IZL8 1130 aaKnown RBP21.95■■□□□ 1.1
TRPM4-201ENST00000252826 RB1CC1Q8TDY2 1594 aa21.9■■□□□ 1.1
TRPM4-201ENST00000252826 NACADO15069 1562 aa21.88■■□□□ 1.09
TRPM4-201ENST00000252826 DCAF1Q9Y4B6 1507 aa21.85■■□□□ 1.09
TRPM4-201ENST00000252826 EHMT2Q96KQ7 1210 aa21.71■■□□□ 1.07
TRPM4-201ENST00000252826 PCGF6Q9BYE7 350 aa21.69■■□□□ 1.06
TRPM4-201ENST00000252826 FAM9AQ8IZU1 332 aaPredicted RBP21.57■■□□□ 1.04
TRPM4-201ENST00000252826 MYO15BQ96JP2 1530 aa21.49■■□□□ 1.03
TRPM4-201ENST00000252826 TRIM41Q8WV44 630 aa21.47■■□□□ 1.03
TRPM4-201ENST00000252826 PPARGC1BQ86YN6 1023 aaKnown RBP21.44■■□□□ 1.02
TRPM4-201ENST00000252826 MYT1Q01538 1121 aa21.4■■□□□ 1.02
TRPM4-201ENST00000252826 CECR2Q9BXF3 1484 aa21.36■■□□□ 1.01
TRPM4-201ENST00000252826 CHIC1Q5VXU3 224 aa21.33■■□□□ 1
TRPM4-201ENST00000252826 RSF1Q96T23 1441 aaPredicted RBP21.29■■□□□ 1
TRPM4-201ENST00000252826 HRCP23327 699 aa21.22■□□□□ 0.99
TRPM4-201ENST00000252826 MROH2BQ7Z745 1585 aa21.07■□□□□ 0.96
TRPM4-201ENST00000252826 BAZ1AQ9NRL2 1556 aaPredicted RBP21.02■□□□□ 0.96
TRPM4-201ENST00000252826 RANGAP1P46060 587 aaPredicted RBP21■□□□□ 0.95
TRPM4-201ENST00000252826 LOC105371045A0A1W2PR82 267 aa20.95■□□□□ 0.94
TRPM4-201ENST00000252826 UBTFP17480 764 aaKnown RBP20.86■□□□□ 0.93
TRPM4-201ENST00000252826 BAZ1BQ9UIG0 1483 aaKnown RBP20.85■□□□□ 0.93
TRPM4-201ENST00000252826 YTHDC1Q96MU7 727 aaKnown RBP20.85■□□□□ 0.93
TRPM4-201ENST00000252826 WIZO95785 1651 aa20.82■□□□□ 0.92
TRPM4-201ENST00000252826 CENPBP07199 599 aaPredicted RBP20.79■□□□□ 0.92
TRPM4-201ENST00000252826 TTBK1Q5TCY1 1321 aaPredicted RBP20.73■□□□□ 0.91
TRPM4-201ENST00000252826 BICRAQ9NZM4 1560 aa20.72■□□□□ 0.91
TRPM4-201ENST00000252826 SMARCA4P51532 1647 aa20.72■□□□□ 0.91
TRPM4-201ENST00000252826 UNC13AQ9UPW8 1703 aa20.65■□□□□ 0.9
TRPM4-201ENST00000252826 ATAD2BQ9ULI0 1458 aa20.64■□□□□ 0.89
TRPM4-201ENST00000252826 CCDC88BA6NC98 1476 aa20.61■□□□□ 0.89
TRPM4-201ENST00000252826 SMARCA2P51531 1590 aa20.59■□□□□ 0.89
TRPM4-201ENST00000252826 APLP2Q06481 763 aa20.54■□□□□ 0.88
TRPM4-201ENST00000252826 EIF4G1Q04637 1599 aaKnown RBP20.52■□□□□ 0.88
TRPM4-201ENST00000252826 TOP2AP11388 1531 aaKnown RBP20.51■□□□□ 0.87
TRPM4-201ENST00000252826 ATP1B4Q9UN42 357 aaPredicted RBP20.49■□□□□ 0.87
TRPM4-201ENST00000252826 GTF3C3Q9Y5Q9 886 aa20.49■□□□□ 0.87
TRPM4-201ENST00000252826 SCAF1Q9H7N4 1312 aaKnown RBP20.44■□□□□ 0.86
TRPM4-201ENST00000252826 CSRNP3Q8WYN3 585 aa20.42■□□□□ 0.86
TRPM4-201ENST00000252826 ERICH6Q7L0X2 663 aa20.37■□□□□ 0.85
TRPM4-201ENST00000252826 WRNQ14191 1432 aaPredicted RBP eCLIP20.37■□□□□ 0.85
TRPM4-201ENST00000252826 ABCC8Q09428 1581 aa20.32■□□□□ 0.84
TRPM4-201ENST00000252826 NCAPD3P42695 1498 aa20.31■□□□□ 0.84
TRPM4-201ENST00000252826 DNAJC5BQ9UF47 199 aa20.29■□□□□ 0.84
TRPM4-201ENST00000252826 ZEB1P37275 1124 aaPredicted RBP20.28■□□□□ 0.84
TRPM4-201ENST00000252826 CCER1Q8TC90 406 aaPredicted RBP20.27■□□□□ 0.84
TRPM4-201ENST00000252826 FBLN2P98095 1184 aa20.27■□□□□ 0.84
TRPM4-201ENST00000252826 CC2D2AQ9P2K1 1620 aa20.26■□□□□ 0.83
TRPM4-201ENST00000252826 CADPSQ9ULU8 1353 aa20.22■□□□□ 0.83
TRPM4-201ENST00000252826 SOGA1O94964 1423 aa20.12■□□□□ 0.81
TRPM4-201ENST00000252826 ERCC6Q03468 1493 aa20.11■□□□□ 0.81
TRPM4-201ENST00000252826 P3H3Q8IVL6 736 aa20.11■□□□□ 0.81
TRPM4-201ENST00000252826 ACIN1Q9UKV3 1341 aaKnown RBP20.06■□□□□ 0.8
TRPM4-201ENST00000252826 PDS5BQ9NTI5 1447 aa20.04■□□□□ 0.8
TRPM4-201ENST00000252826 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.03■□□□□ 0.8
TRPM4-201ENST00000252826 HNRNPUL2Q1KMD3 747 aaKnown RBP20.03■□□□□ 0.8
TRPM4-201ENST00000252826 HMGXB3Q12766 1538 aa20.03■□□□□ 0.8
TRPM4-201ENST00000252826 TRIM26Q12899 539 aaPredicted RBP20.02■□□□□ 0.8
TRPM4-201ENST00000252826 NESP48681 1621 aa20.01■□□□□ 0.79
TRPM4-201ENST00000252826 NEUROD1Q13562 356 aa20■□□□□ 0.79
TRPM4-201ENST00000252826 FANCD2Q9BXW9 1451 aa19.97■□□□□ 0.79
TRPM4-201ENST00000252826 PEG3Q9GZU2 1588 aa19.96■□□□□ 0.79
TRPM4-201ENST00000252826 KIF27Q86VH2 1401 aa19.95■□□□□ 0.78
TRPM4-201ENST00000252826 CUX2O14529 1486 aa19.93■□□□□ 0.78
TRPM4-201ENST00000252826 EEA1Q15075 1411 aa19.91■□□□□ 0.78
TRPM4-201ENST00000252826 DIEXFQ68CQ4 756 aaKnown RBP19.91■□□□□ 0.78
TRPM4-201ENST00000252826 CFTRP13569 1480 aa19.9■□□□□ 0.78
TRPM4-201ENST00000252826 ARID3CA6NKF2 412 aa19.9■□□□□ 0.78
TRPM4-201ENST00000252826 TDRD9Q8NDG6 1382 aaKnown RBP19.89■□□□□ 0.78
TRPM4-201ENST00000252826 RUSC2Q8N2Y8 1516 aa19.89■□□□□ 0.78
TRPM4-201ENST00000252826 CEP164Q9UPV0 1460 aa19.89■□□□□ 0.77
TRPM4-201ENST00000252826 ITGAEP38570 1179 aa19.88■□□□□ 0.77
TRPM4-201ENST00000252826 BCL11AQ9H165 835 aa19.86■□□□□ 0.77
TRPM4-201ENST00000252826 CHMP7Q8WUX9 453 aaPredicted RBP19.86■□□□□ 0.77
TRPM4-201ENST00000252826 BCANQ96GW7 911 aa19.84■□□□□ 0.77
TRPM4-201ENST00000252826 GOLGA3Q08378 1498 aa19.81■□□□□ 0.76
TRPM4-201ENST00000252826 CARMIL1Q5VZK9 1371 aa19.76■□□□□ 0.75
TRPM4-201ENST00000252826 CLIP1P30622 1438 aa19.74■□□□□ 0.75
TRPM4-201ENST00000252826 CEP162Q5TB80 1403 aa19.74■□□□□ 0.75
TRPM4-201ENST00000252826 SYNJ1O43426 1573 aa19.73■□□□□ 0.75
TRPM4-201ENST00000252826 RAD54L2Q9Y4B4 1467 aa19.72■□□□□ 0.75
TRPM4-201ENST00000252826 FGD5Q6ZNL6 1462 aa19.72■□□□□ 0.75
TRPM4-201ENST00000252826 TNIKQ9UKE5 1360 aa19.7■□□□□ 0.74
TRPM4-201ENST00000252826 NEFLP07196 543 aa19.66■□□□□ 0.74
TRPM4-201ENST00000252826 CUX1P39880 1505 aa19.63■□□□□ 0.73
TRPM4-201ENST00000252826 FAM50AQ14320 339 aaKnown RBP19.62■□□□□ 0.73
TRPM4-201ENST00000252826 RAPGEF2Q9Y4G8 1499 aa19.61■□□□□ 0.73
TRPM4-201ENST00000252826 TOPBP1Q92547 1522 aa19.56■□□□□ 0.72
TRPM4-201ENST00000252826 IGF1RP08069 1367 aa19.54■□□□□ 0.72
TRPM4-201ENST00000252826 LAMC3Q9Y6N6 1575 aa19.53■□□□□ 0.72
TRPM4-201ENST00000252826 AQRO60306 1485 aaKnown RBP eCLIP19.53■□□□□ 0.727e-7■■■■□ 25.1
TRPM4-201ENST00000252826 TOP2BQ02880 1626 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms