Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.55■□□□□ 0.24
FNDC3AQ9Y2H6 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.55■□□□□ 0.24
FNDC3AQ9Y2H6 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FNDC3AQ9Y2H6 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
FNDC3AQ9Y2H6 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.55■□□□□ 0.24
FNDC3AQ9Y2H6 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FNDC3AQ9Y2H6 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FNDC3AQ9Y2H6 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
FNDC3AQ9Y2H6 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FNDC3AQ9Y2H6 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FNDC3AQ9Y2H6 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
FNDC3AQ9Y2H6 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FNDC3AQ9Y2H6 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FNDC3AQ9Y2H6 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FNDC3AQ9Y2H6 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.55■□□□□ 0.24
FNDC3AQ9Y2H6 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FNDC3AQ9Y2H6 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
FNDC3AQ9Y2H6 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.55■□□□□ 0.24
FNDC3AQ9Y2H6 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
FNDC3AQ9Y2H6 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
FNDC3AQ9Y2H6 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FNDC3AQ9Y2H6 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
FNDC3AQ9Y2H6 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
FNDC3AQ9Y2H6 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
FNDC3AQ9Y2H6 WASH6P-202ENST00000359512 1437 ntBASIC16.54■□□□□ 0.24
FNDC3AQ9Y2H6 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.54■□□□□ 0.24
FNDC3AQ9Y2H6 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.54■□□□□ 0.24
FNDC3AQ9Y2H6 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FNDC3AQ9Y2H6 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
FNDC3AQ9Y2H6 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FNDC3AQ9Y2H6 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
FNDC3AQ9Y2H6 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
FNDC3AQ9Y2H6 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FNDC3AQ9Y2H6 GK-202ENST00000378941 458 ntTSL 3 BASIC16.54■□□□□ 0.24
FNDC3AQ9Y2H6 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
FNDC3AQ9Y2H6 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.54■□□□□ 0.24
FNDC3AQ9Y2H6 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.54■□□□□ 0.24
FNDC3AQ9Y2H6 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FNDC3AQ9Y2H6 GAPDHP21-201ENST00000450301 1010 ntBASIC16.54■□□□□ 0.24
FNDC3AQ9Y2H6 AC097493.3-201ENST00000509725 367 ntBASIC16.54■□□□□ 0.24
FNDC3AQ9Y2H6 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
FNDC3AQ9Y2H6 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FNDC3AQ9Y2H6 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.54■□□□□ 0.24
FNDC3AQ9Y2H6 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.54■□□□□ 0.24
FNDC3AQ9Y2H6 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FNDC3AQ9Y2H6 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FNDC3AQ9Y2H6 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.54■□□□□ 0.24
FNDC3AQ9Y2H6 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
FNDC3AQ9Y2H6 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FNDC3AQ9Y2H6 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
FNDC3AQ9Y2H6 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
FNDC3AQ9Y2H6 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
FNDC3AQ9Y2H6 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FNDC3AQ9Y2H6 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.54■□□□□ 0.24
FNDC3AQ9Y2H6 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FNDC3AQ9Y2H6 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
FNDC3AQ9Y2H6 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
FNDC3AQ9Y2H6 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 ALG1L8P-201ENST00000533887 760 ntBASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FNDC3AQ9Y2H6 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
FNDC3AQ9Y2H6 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms