Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.76□□□□□ -0.21
LRRK2Q5S007 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRK2Q5S007 NEU3-205ENST00000531619 582 ntTSL 5 BASIC13.76□□□□□ -0.21
LRRK2Q5S007 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC13.76□□□□□ -0.21
LRRK2Q5S007 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRK2Q5S007 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
LRRK2Q5S007 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRRK2Q5S007 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRK2Q5S007 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
LRRK2Q5S007 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRK2Q5S007 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.76□□□□□ -0.21
LRRK2Q5S007 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRK2Q5S007 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC13.76□□□□□ -0.21
LRRK2Q5S007 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRK2Q5S007 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRRK2Q5S007 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRK2Q5S007 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRK2Q5S007 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRK2Q5S007 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
LRRK2Q5S007 AC026316.1-201ENST00000398900 414 ntBASIC13.75□□□□□ -0.21
LRRK2Q5S007 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.75□□□□□ -0.21
LRRK2Q5S007 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LRRK2Q5S007 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC13.75□□□□□ -0.21
LRRK2Q5S007 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
LRRK2Q5S007 AC009053.2-201ENST00000563701 2365 ntBASIC13.75□□□□□ -0.21
LRRK2Q5S007 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRK2Q5S007 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
LRRK2Q5S007 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LRRK2Q5S007 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC13.75□□□□□ -0.21
LRRK2Q5S007 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRK2Q5S007 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC13.75□□□□□ -0.21
LRRK2Q5S007 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRK2Q5S007 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC13.75□□□□□ -0.21
LRRK2Q5S007 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRK2Q5S007 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRK2Q5S007 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LRRK2Q5S007 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRK2Q5S007 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC13.75□□□□□ -0.21
LRRK2Q5S007 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LRRK2Q5S007 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
LRRK2Q5S007 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRK2Q5S007 AC004987.2-201ENST00000395959 1148 ntBASIC13.75□□□□□ -0.21
LRRK2Q5S007 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LRRK2Q5S007 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.75□□□□□ -0.21
LRRK2Q5S007 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC13.75□□□□□ -0.21
LRRK2Q5S007 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.75□□□□□ -0.21
LRRK2Q5S007 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.75□□□□□ -0.21
LRRK2Q5S007 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.75□□□□□ -0.21
LRRK2Q5S007 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.75□□□□□ -0.21
LRRK2Q5S007 AP001065.2-201ENST00000617205 644 ntBASIC13.75□□□□□ -0.21
LRRK2Q5S007 AC091544.8-201ENST00000619490 361 ntBASIC13.75□□□□□ -0.21
LRRK2Q5S007 AC022748.3-201ENST00000621828 275 ntBASIC13.75□□□□□ -0.21
LRRK2Q5S007 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC13.75□□□□□ -0.21
LRRK2Q5S007 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRK2Q5S007 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.75□□□□□ -0.21
LRRK2Q5S007 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRK2Q5S007 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRK2Q5S007 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LRRK2Q5S007 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRK2Q5S007 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRK2Q5S007 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LRRK2Q5S007 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
LRRK2Q5S007 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LRRK2Q5S007 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC13.75□□□□□ -0.21
LRRK2Q5S007 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LRRK2Q5S007 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRK2Q5S007 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.75□□□□□ -0.21
LRRK2Q5S007 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRK2Q5S007 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRK2Q5S007 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRK2Q5S007 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LRRK2Q5S007 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRK2Q5S007 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.74□□□□□ -0.21
LRRK2Q5S007 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.74□□□□□ -0.21
LRRK2Q5S007 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC13.74□□□□□ -0.21
LRRK2Q5S007 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
LRRK2Q5S007 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
LRRK2Q5S007 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.74□□□□□ -0.21
LRRK2Q5S007 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRK2Q5S007 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRK2Q5S007 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRK2Q5S007 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRK2Q5S007 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
LRRK2Q5S007 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LRRK2Q5S007 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC13.74□□□□□ -0.21
LRRK2Q5S007 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.74□□□□□ -0.21
LRRK2Q5S007 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRK2Q5S007 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LRRK2Q5S007 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC13.74□□□□□ -0.21
LRRK2Q5S007 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.74□□□□□ -0.21
LRRK2Q5S007 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
LRRK2Q5S007 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
LRRK2Q5S007 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRK2Q5S007 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LRRK2Q5S007 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.74□□□□□ -0.21
LRRK2Q5S007 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC13.74□□□□□ -0.21
LRRK2Q5S007 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC13.74□□□□□ -0.21
LRRK2Q5S007 RN7SL11P-201ENST00000471305 293 ntBASIC13.74□□□□□ -0.21
LRRK2Q5S007 AC015910.1-201ENST00000579400 975 ntBASIC13.74□□□□□ -0.21
LRRK2Q5S007 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms