RNA–Protein interactions for RNA: ENST00000311862.9

PRG2-201, Transcript of proteoglycan 2, pro eosinophil major basic protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRG2, Length 1,424 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRG2-201ENST00000311862 NISCHQ9Y2I1 1504 aa35.37■■■■□ 3.25
PRG2-201ENST00000311862 ABCC9O60706 1549 aa31.94■■■□□ 2.7
PRG2-201ENST00000311862 CCDC180Q9P1Z9 1646 aa31.75■■■□□ 2.67
PRG2-201ENST00000311862 RB1CC1Q8TDY2 1594 aa30.28■■■□□ 2.44
PRG2-201ENST00000311862 DNAJC5BQ9UF47 199 aa30.22■■■□□ 2.43
PRG2-201ENST00000311862 NACADO15069 1562 aa30.06■■■□□ 2.4
PRG2-201ENST00000311862 DCAF8L2P0C7V8 631 aa29.89■■■□□ 2.38
PRG2-201ENST00000311862 PABPN1Q86U42 306 aaKnown RBP eCLIP29.75■■■□□ 2.35
PRG2-201ENST00000311862 UNC13AQ9UPW8 1703 aa29.69■■■□□ 2.34
PRG2-201ENST00000311862 MYO15BQ96JP2 1530 aa29.6■■■□□ 2.33
PRG2-201ENST00000311862 BICRAQ9NZM4 1560 aa29.52■■■□□ 2.32
PRG2-201ENST00000311862 ZCCHC6Q5VYS8 1495 aaKnown RBP29.27■■■□□ 2.28
PRG2-201ENST00000311862 DCAF1Q9Y4B6 1507 aa29.18■■■□□ 2.26
PRG2-201ENST00000311862 SHROOM4Q9ULL8 1493 aa28.96■■■□□ 2.23
PRG2-201ENST00000311862 SCRIBQ14160 1630 aa28.94■■■□□ 2.22
PRG2-201ENST00000311862 CC2D2AQ9P2K1 1620 aa28.85■■■□□ 2.21
PRG2-201ENST00000311862 CECR2Q9BXF3 1484 aa28.76■■■□□ 2.2
PRG2-201ENST00000311862 EIF4G1Q04637 1599 aaKnown RBP28.74■■■□□ 2.19
PRG2-201ENST00000311862 AEBP2Q6ZN18 517 aaPredicted RBP28.04■■■□□ 2.08
PRG2-201ENST00000311862 NCAPD3P42695 1498 aa27.8■■■□□ 2.04
PRG2-201ENST00000311862 DNAJC5Q9H3Z4 198 aa27.77■■■□□ 2.04
PRG2-201ENST00000311862 ATAD2BQ9ULI0 1458 aa27.7■■■□□ 2.02
PRG2-201ENST00000311862 SMARCA4P51532 1647 aa27.6■■■□□ 2.01
PRG2-201ENST00000311862 SMARCA2P51531 1590 aa27.54■■■□□ 2
PRG2-201ENST00000311862 CUX2O14529 1486 aa27.53■■■□□ 2
PRG2-201ENST00000311862 HMGXB3Q12766 1538 aa27.52■■■□□ 2
PRG2-201ENST00000311862 ERCC6Q03468 1493 aa27.5■■□□□ 1.99
PRG2-201ENST00000311862 CHIC1Q5VXU3 224 aa27.5■■□□□ 1.99
PRG2-201ENST00000311862 NESP48681 1621 aa27.44■■□□□ 1.98
PRG2-201ENST00000311862 BAZ1AQ9NRL2 1556 aaPredicted RBP27.42■■□□□ 1.98
PRG2-201ENST00000311862 BAZ1BQ9UIG0 1483 aaKnown RBP27.36■■□□□ 1.97
PRG2-201ENST00000311862 PEG3Q9GZU2 1588 aa27.35■■□□□ 1.97
PRG2-201ENST00000311862 MROH2BQ7Z745 1585 aa27.28■■□□□ 1.96
PRG2-201ENST00000311862 THOC2Q8NI27 1593 aaKnown RBP27.15■■□□□ 1.94
PRG2-201ENST00000311862 LAMC3Q9Y6N6 1575 aa27.14■■□□□ 1.94
PRG2-201ENST00000311862 KIF21AQ7Z4S6 1674 aa27.04■■□□□ 1.92
PRG2-201ENST00000311862 PDS5BQ9NTI5 1447 aa26.97■■□□□ 1.91
PRG2-201ENST00000311862 WIZO95785 1651 aa26.95■■□□□ 1.9
PRG2-201ENST00000311862 CADPSQ9ULU8 1353 aa26.92■■□□□ 1.9
PRG2-201ENST00000311862 MRC2Q9UBG0 1479 aa26.77■■□□□ 1.88
PRG2-201ENST00000311862 WDR62O43379 1518 aa26.72■■□□□ 1.87
PRG2-201ENST00000311862 RSF1Q96T23 1441 aaPredicted RBP26.66■■□□□ 1.86
PRG2-201ENST00000311862 CEP164Q9UPV0 1460 aa26.62■■□□□ 1.85
PRG2-201ENST00000311862 FANCD2Q9BXW9 1451 aa26.61■■□□□ 1.85
PRG2-201ENST00000311862 CFTRP13569 1480 aa26.6■■□□□ 1.85
PRG2-201ENST00000311862 TOP2AP11388 1531 aaKnown RBP26.54■■□□□ 1.84
PRG2-201ENST00000311862 URB2Q14146 1524 aaKnown RBP26.44■■□□□ 1.82
PRG2-201ENST00000311862 TRIM41Q8WV44 630 aa26.44■■□□□ 1.82
PRG2-201ENST00000311862 CCDC88BA6NC98 1476 aa26.3■■□□□ 1.8
PRG2-201ENST00000311862 OSCARQ8IYS5 282 aa26.29■■□□□ 1.8
PRG2-201ENST00000311862 PRDM2Q13029 1718 aa26.28■■□□□ 1.8
PRG2-201ENST00000311862 ZNF608Q9ULD9 1512 aaPredicted RBP26.15■■□□□ 1.78
PRG2-201ENST00000311862 TOPBP1Q92547 1522 aa26.11■■□□□ 1.77
PRG2-201ENST00000311862 IFT140Q96RY7 1462 aa26.1■■□□□ 1.77
PRG2-201ENST00000311862 ABCC8Q09428 1581 aa25.98■■□□□ 1.75
PRG2-201ENST00000311862 RIMBP3CA6NJZ7 1639 aa25.97■■□□□ 1.75
PRG2-201ENST00000311862 RIMBP3BA6NNM3 1639 aa25.97■■□□□ 1.75
PRG2-201ENST00000311862 RIMBP3Q9UFD9 1639 aa25.97■■□□□ 1.75
PRG2-201ENST00000311862 DNMBPQ6XZF7 1577 aa25.97■■□□□ 1.75
PRG2-201ENST00000311862 EIF4G3O43432 1585 aaKnown RBP25.94■■□□□ 1.74
PRG2-201ENST00000311862 TARBP1Q13395 1621 aaKnown RBP25.91■■□□□ 1.74
PRG2-201ENST00000311862 AQRO60306 1485 aaKnown RBP eCLIP25.89■■□□□ 1.731e-8■■■■□ 24
PRG2-201ENST00000311862 ARHGEF11O15085 1522 aa25.87■■□□□ 1.73
PRG2-201ENST00000311862 POLA1P09884 1462 aaPredicted RBP25.83■■□□□ 1.73
PRG2-201ENST00000311862 CHD1O14646 1710 aa25.79■■□□□ 1.72
PRG2-201ENST00000311862 RAD54L2Q9Y4B4 1467 aa25.77■■□□□ 1.72
PRG2-201ENST00000311862 SOGA1O94964 1423 aa25.71■■□□□ 1.71
PRG2-201ENST00000311862 CYB5RLQ6IPT4 315 aa25.71■■□□□ 1.71
PRG2-201ENST00000311862 TDRD9Q8NDG6 1382 aaKnown RBP25.7■■□□□ 1.71
PRG2-201ENST00000311862 FBLN2P98095 1184 aa25.69■■□□□ 1.7
PRG2-201ENST00000311862 FGD5Q6ZNL6 1462 aa25.64■■□□□ 1.69
PRG2-201ENST00000311862 CUX1P39880 1505 aa25.63■■□□□ 1.69
PRG2-201ENST00000311862 ARAP1Q96P48 1450 aa25.62■■□□□ 1.69
PRG2-201ENST00000311862 SNAPC4Q5SXM2 1469 aa25.58■■□□□ 1.68
PRG2-201ENST00000311862 WDR97A6NE52 1622 aa25.54■■□□□ 1.68
PRG2-201ENST00000311862 CLASP1Q7Z460 1538 aa25.51■■□□□ 1.67
PRG2-201ENST00000311862 MAGI1Q96QZ7 1491 aaPredicted RBP25.48■■□□□ 1.67
PRG2-201ENST00000311862 GRIN2BQ13224 1484 aa25.47■■□□□ 1.67
PRG2-201ENST00000311862 CHMP7Q8WUX9 453 aaPredicted RBP25.46■■□□□ 1.67
PRG2-201ENST00000311862 SYNJ2O15056 1496 aa25.41■■□□□ 1.66
PRG2-201ENST00000311862 SYNJ1O43426 1573 aa25.4■■□□□ 1.66
PRG2-201ENST00000311862 TRHP20396 242 aaPredicted RBP25.4■■□□□ 1.66
PRG2-201ENST00000311862 GAPVD1Q14C86 1478 aa25.38■■□□□ 1.65
PRG2-201ENST00000311862 PBRM1Q86U86 1689 aa25.37■■□□□ 1.65
PRG2-201ENST00000311862 SUPT5HO00267 1087 aaKnown RBP25.35■■□□□ 1.65
PRG2-201ENST00000311862 ABCA10Q8WWZ4 1543 aa25.34■■□□□ 1.65
PRG2-201ENST00000311862 ABCA5Q8WWZ7 1642 aa25.32■■□□□ 1.64
PRG2-201ENST00000311862 WRNQ14191 1432 aaPredicted RBP eCLIP25.18■■□□□ 1.62
PRG2-201ENST00000311862 GRIN2AQ12879 1464 aa25.16■■□□□ 1.62
PRG2-201ENST00000311862 ERCC6L2Q5T890 1561 aa25.16■■□□□ 1.62
PRG2-201ENST00000311862 BIVM-ERCC5R4GMW8 1640 aa25.15■■□□□ 1.62
PRG2-201ENST00000311862 TOP2BQ02880 1626 aa25.14■■□□□ 1.61
PRG2-201ENST00000311862 ADAMTS12P58397 1594 aa25.12■■□□□ 1.61
PRG2-201ENST00000311862 CEP170Q5SW79 1584 aa25.11■■□□□ 1.61
PRG2-201ENST00000311862 NUP160Q12769 1436 aa25.1■■□□□ 1.61
PRG2-201ENST00000311862 FHAD1B1AJZ9 1412 aa25.04■■□□□ 1.6
PRG2-201ENST00000311862 SHROOM2Q13796 1616 aa25.01■■□□□ 1.59
PRG2-201ENST00000311862 ERICH3Q5RHP9 1530 aa25■■□□□ 1.59
PRG2-201ENST00000311862 PRG4Q92954 1404 aaPredicted RBP24.86■■□□□ 1.57
PRG2-201ENST00000311862 JPH4Q96JJ6 628 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms