Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.523e-6■□□□□ 10
XRN2Q9H0D6 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.413e-6■□□□□ 10
XRN2Q9H0D6 PLCG1-212ENST00000492148 597 ntTSL 216.23■□□□□ 0.193e-6■□□□□ 10
XRN2Q9H0D6 SDC2-205ENST00000520233 563 ntTSL 420.04■□□□□ 0.85e-8■□□□□ 10
XRN2Q9H0D6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.2■□□□□ 0.665e-8■□□□□ 10
XRN2Q9H0D6 SDC2-203ENST00000519587 557 ntTSL 415.9■□□□□ 0.145e-8■□□□□ 10
XRN2Q9H0D6 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.215e-8■□□□□ 10
XRN2Q9H0D6 SDC2-207ENST00000522911 677 ntTSL 3 BASIC11.52□□□□□ -0.575e-8■□□□□ 10
XRN2Q9H0D6 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.656e-7■□□□□ 10
XRN2Q9H0D6 RHOT2-222ENST00000569675 2559 ntTSL 218.11■□□□□ 0.496e-7■□□□□ 10
XRN2Q9H0D6 RHOT2-227ENST00000602564 3695 ntTSL 514.57□□□□□ -0.086e-7■□□□□ 10
XRN2Q9H0D6 GTPBP2-203ENST00000419497 1394 ntTSL 218.58■□□□□ 0.574e-8■□□□□ 10
XRN2Q9H0D6 GTPBP2-204ENST00000432918 1850 ntTSL 314.25□□□□□ -0.134e-8■□□□□ 10
XRN2Q9H0D6 CERCAM-203ENST00000411852 1176 ntTSL 530.72■■■□□ 2.516e-6■□□□□ 9.9
XRN2Q9H0D6 CERCAM-212ENST00000493788 901 ntTSL 530.72■■■□□ 2.516e-6■□□□□ 9.9
XRN2Q9H0D6 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.466e-6■□□□□ 9.9
XRN2Q9H0D6 ZNF292-208ENST00000518845 277 ntTSL 324.62■■□□□ 1.536e-6■□□□□ 9.9
XRN2Q9H0D6 STRN3-207ENST00000555358 2208 ntTSL 1 (best)24.42■■□□□ 1.56e-6■□□□□ 9.9
XRN2Q9H0D6 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.396e-6■□□□□ 9.9
XRN2Q9H0D6 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.42■■□□□ 1.346e-6■□□□□ 9.9
XRN2Q9H0D6 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC22.72■■□□□ 1.236e-6■□□□□ 9.9
XRN2Q9H0D6 PPDPF-204ENST00000473620 478 ntTSL 222.61■■□□□ 1.216e-6■□□□□ 9.9
XRN2Q9H0D6 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.116e-6■□□□□ 9.9
XRN2Q9H0D6 PPDPF-203ENST00000464438 373 ntTSL 221.77■■□□□ 1.086e-6■□□□□ 9.9
XRN2Q9H0D6 TXNRD2-220ENST00000634537 1086 ntTSL 520.95■□□□□ 0.946e-6■□□□□ 9.9
XRN2Q9H0D6 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.89■□□□□ 0.936e-6■□□□□ 9.9
XRN2Q9H0D6 PLXNA3-205ENST00000482598 280 ntTSL 320.82■□□□□ 0.926e-6■□□□□ 9.9
XRN2Q9H0D6 TXNRD2-207ENST00000462843 810 ntTSL 320.17■□□□□ 0.826e-6■□□□□ 9.9
XRN2Q9H0D6 TXNRD2-219ENST00000634471 748 ntTSL 320.17■□□□□ 0.826e-6■□□□□ 9.9
XRN2Q9H0D6 TGIF1-221ENST00000552383 1267 ntTSL 220.14■□□□□ 0.816e-6■□□□□ 9.9
XRN2Q9H0D6 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.13■□□□□ 0.496e-6■□□□□ 9.9
XRN2Q9H0D6 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.01■□□□□ 0.476e-6■□□□□ 9.9
XRN2Q9H0D6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.456e-6■□□□□ 9.9
XRN2Q9H0D6 TXNRD2-213ENST00000487165 2020 ntTSL 1 (best)17.67■□□□□ 0.426e-6■□□□□ 9.9
XRN2Q9H0D6 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.46e-6■□□□□ 9.9
XRN2Q9H0D6 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.366e-6■□□□□ 9.9
XRN2Q9H0D6 TSC1-205ENST00000475903 820 ntTSL 417.12■□□□□ 0.336e-6■□□□□ 9.9
XRN2Q9H0D6 ZNF292-207ENST00000496806 770 ntTSL 317.12■□□□□ 0.336e-6■□□□□ 9.9
XRN2Q9H0D6 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC17.06■□□□□ 0.326e-6■□□□□ 9.9
XRN2Q9H0D6 CERCAM-204ENST00000420034 551 ntTSL 416.99■□□□□ 0.316e-6■□□□□ 9.9
XRN2Q9H0D6 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.36e-6■□□□□ 9.9
XRN2Q9H0D6 TAOK2-205ENST00000566552 2372 ntTSL 216.94■□□□□ 0.36e-6■□□□□ 9.9
XRN2Q9H0D6 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.84■□□□□ 0.296e-6■□□□□ 9.9
XRN2Q9H0D6 CERCAM-205ENST00000420512 887 ntTSL 316.74■□□□□ 0.276e-6■□□□□ 9.9
XRN2Q9H0D6 TSC1-206ENST00000490179 681 ntTSL 316.73■□□□□ 0.276e-6■□□□□ 9.9
XRN2Q9H0D6 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.266e-6■□□□□ 9.9
XRN2Q9H0D6 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC16.43■□□□□ 0.226e-6■□□□□ 9.9
XRN2Q9H0D6 TXNRD2-215ENST00000494454 2004 ntTSL 1 (best)16.42■□□□□ 0.226e-6■□□□□ 9.9
XRN2Q9H0D6 TGIF1-209ENST00000546979 554 ntTSL 316.37■□□□□ 0.216e-6■□□□□ 9.9
XRN2Q9H0D6 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.93□□□□□ -0.026e-6■□□□□ 9.9
XRN2Q9H0D6 ENO1-206ENST00000497492 647 ntTSL 214.41□□□□□ -0.16e-6■□□□□ 9.9
XRN2Q9H0D6 TXNRD2-216ENST00000495655 2700 ntTSL 214.1□□□□□ -0.156e-6■□□□□ 9.9
XRN2Q9H0D6 CERCAM-206ENST00000447915 530 ntTSL 513.93□□□□□ -0.186e-6■□□□□ 9.9
XRN2Q9H0D6 ENO1-202ENST00000464920 2266 ntTSL 1 (best)13.87□□□□□ -0.196e-6■□□□□ 9.9
XRN2Q9H0D6 AC109446.3-201ENST00000567344 641 ntTSL 3 BASIC13.67□□□□□ -0.226e-6■□□□□ 9.9
XRN2Q9H0D6 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.356e-6■□□□□ 9.9
XRN2Q9H0D6 CSRNP1-202ENST00000514182 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.496e-6■□□□□ 9.9
XRN2Q9H0D6 TMEM63A-201ENST00000366835 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.676e-6■□□□□ 9.9
XRN2Q9H0D6 RAB14-202ENST00000451303 711 ntTSL 310.35□□□□□ -0.756e-6■□□□□ 9.9
XRN2Q9H0D6 TGIF1-216ENST00000550958 706 ntTSL 310.34□□□□□ -0.756e-6■□□□□ 9.9
XRN2Q9H0D6 TGIF1-223ENST00000618001 3030 ntTSL 2 BASIC9.93□□□□□ -0.826e-6■□□□□ 9.9
XRN2Q9H0D6 TSC1-207ENST00000493467 2219 ntTSL 1 (best)9.58□□□□□ -0.886e-6■□□□□ 9.9
XRN2Q9H0D6 EIF2AK1-209ENST00000490523 905 ntTSL 29.52□□□□□ -0.896e-6■□□□□ 9.9
XRN2Q9H0D6 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.236e-6■□□□□ 9.9
XRN2Q9H0D6 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC7.31□□□□□ -1.246e-6■□□□□ 9.9
XRN2Q9H0D6 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.256e-6■□□□□ 9.9
XRN2Q9H0D6 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.266e-6■□□□□ 9.9
XRN2Q9H0D6 TGIF1-215ENST00000549780 801 ntTSL 56.68□□□□□ -1.346e-6■□□□□ 9.9
XRN2Q9H0D6 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.446e-6■□□□□ 9.9
XRN2Q9H0D6 TGIF1-212ENST00000549253 563 ntTSL 35.97□□□□□ -1.456e-6■□□□□ 9.9
XRN2Q9H0D6 ZNF292-205ENST00000466062 838 ntTSL 55.95□□□□□ -1.466e-6■□□□□ 9.9
XRN2Q9H0D6 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.466e-6■□□□□ 9.9
XRN2Q9H0D6 CD69-202ENST00000416624 962 ntTSL 25.74□□□□□ -1.496e-6■□□□□ 9.9
XRN2Q9H0D6 CD69-203ENST00000536709 1020 ntTSL 2 BASIC5.67□□□□□ -1.56e-6■□□□□ 9.9
XRN2Q9H0D6 CHKB-207ENST00000476289 1010 ntTSL 538.41■■■■□ 3.743e-11■□□□□ 9.9
XRN2Q9H0D6 CHKB-210ENST00000484266 1401 ntTSL 237.95■■■■□ 3.673e-11■□□□□ 9.9
XRN2Q9H0D6 CHKB-205ENST00000468532 1052 ntTSL 536.82■■■■□ 3.483e-11■□□□□ 9.9
XRN2Q9H0D6 NEK6-209ENST00000444973 790 ntTSL 534.55■■■■□ 3.123e-11■□□□□ 9.9
XRN2Q9H0D6 CHKB-212ENST00000492582 2069 ntTSL 229.33■■■□□ 2.293e-11■□□□□ 9.9
XRN2Q9H0D6 CHKB-208ENST00000479003 2114 ntTSL 228.69■■■□□ 2.183e-11■□□□□ 9.9
XRN2Q9H0D6 PHC2-212ENST00000493483 760 ntTSL 327.52■■■□□ 24e-6■□□□□ 9.9
XRN2Q9H0D6 EPS8L2-222ENST00000532545 419 ntTSL 327.06■■□□□ 1.926e-13■□□□□ 9.9
XRN2Q9H0D6 PHC2-206ENST00000467894 1466 ntTSL 526.7■■□□□ 1.874e-6■□□□□ 9.9
XRN2Q9H0D6 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC25.95■■□□□ 1.741e-6■□□□□ 9.9
XRN2Q9H0D6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.223e-11■□□□□ 9.9
XRN2Q9H0D6 PHC2-210ENST00000485928 2548 ntTSL 222.41■■□□□ 1.184e-6■□□□□ 9.9
XRN2Q9H0D6 CHKB-204ENST00000465842 428 ntTSL 222.2■■□□□ 1.143e-11■□□□□ 9.9
XRN2Q9H0D6 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.134e-6■□□□□ 9.9
XRN2Q9H0D6 CHKB-CPT1B-203ENST00000492556 4906 ntTSL 220.79■□□□□ 0.923e-11■□□□□ 9.9
XRN2Q9H0D6 CHKB-209ENST00000481673 1856 ntTSL 1 (best)20.57■□□□□ 0.883e-11■□□□□ 9.9
XRN2Q9H0D6 CHKB-202ENST00000463053 886 ntTSL 320.14■□□□□ 0.813e-11■□□□□ 9.9
XRN2Q9H0D6 SNX6-210ENST00000557341 559 ntTSL 517.1■□□□□ 0.338e-7■□□□□ 9.9
XRN2Q9H0D6 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.58■□□□□ 0.258e-7■□□□□ 9.9
XRN2Q9H0D6 SNX6-206ENST00000556162 1855 ntTSL 216.16■□□□□ 0.188e-7■□□□□ 9.9
XRN2Q9H0D6 SNX6-203ENST00000555416 1215 ntTSL 1 (best)16.12■□□□□ 0.178e-7■□□□□ 9.9
XRN2Q9H0D6 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.143e-7■□□□□ 9.9
XRN2Q9H0D6 TMEM184A-210ENST00000468535 2843 ntTSL 215.86■□□□□ 0.133e-7■□□□□ 9.9
XRN2Q9H0D6 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.32■□□□□ 0.041e-6■□□□□ 9.9
XRN2Q9H0D6 SNX6-209ENST00000557265 725 ntTSL 315.26■□□□□ 0.038e-7■□□□□ 9.9
XRN2Q9H0D6 SNX6-207ENST00000556303 539 ntTSL 215.07■□□□□ 08e-7■□□□□ 9.9
Retrieved 100 of 21,068 protein–RNA pairs in 124.9 ms