RNA–Protein interactions for RNA: ENST00000482598.1

PLXNA3-205, Transcript of plexin A3, humanhuman

TSL 3

Gene PLXNA3, Length 280 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-205ENST00000482598 NISCHQ9Y2I1 1504 aa43.65■■■■■ 4.58
PLXNA3-205ENST00000482598 CCDC180Q9P1Z9 1646 aa38.84■■■■□ 3.81
PLXNA3-205ENST00000482598 ABCC9O60706 1549 aa37.72■■■■□ 3.63
PLXNA3-205ENST00000482598 NACADO15069 1562 aa36.44■■■■□ 3.42
PLXNA3-205ENST00000482598 RB1CC1Q8TDY2 1594 aa36.43■■■■□ 3.42
PLXNA3-205ENST00000482598 ZCCHC6Q5VYS8 1495 aaKnown RBP36.43■■■■□ 3.42
PLXNA3-205ENST00000482598 MYO15BQ96JP2 1530 aa36.34■■■■□ 3.41
PLXNA3-205ENST00000482598 DCAF1Q9Y4B6 1507 aa36.21■■■■□ 3.39
PLXNA3-205ENST00000482598 DCAF8L2P0C7V8 631 aa36.13■■■■□ 3.37
PLXNA3-205ENST00000482598 UNC13AQ9UPW8 1703 aa35.63■■■■□ 3.29
PLXNA3-205ENST00000482598 BICRAQ9NZM4 1560 aa35.36■■■■□ 3.25
PLXNA3-205ENST00000482598 SCRIBQ14160 1630 aa35.31■■■■□ 3.24
PLXNA3-205ENST00000482598 PABPN1Q86U42 306 aaKnown RBP eCLIP35.19■■■■□ 3.22
PLXNA3-205ENST00000482598 SHROOM4Q9ULL8 1493 aa35.08■■■■□ 3.21
PLXNA3-205ENST00000482598 DNAJC5BQ9UF47 199 aa34.52■■■■□ 3.12
PLXNA3-205ENST00000482598 EIF4G1Q04637 1599 aaKnown RBP34.39■■■■□ 3.1
PLXNA3-205ENST00000482598 CC2D2AQ9P2K1 1620 aa34.2■■■■□ 3.07
PLXNA3-205ENST00000482598 CECR2Q9BXF3 1484 aa33.95■■■■□ 3.02
PLXNA3-205ENST00000482598 SMARCA4P51532 1647 aa33.86■■■■□ 3.01
PLXNA3-205ENST00000482598 BAZ1AQ9NRL2 1556 aaPredicted RBP33.82■■■■□ 3
PLXNA3-205ENST00000482598 NCAPD3P42695 1498 aa33.63■■■□□ 2.97
PLXNA3-205ENST00000482598 ATAD2BQ9ULI0 1458 aa33.63■■■□□ 2.97
PLXNA3-205ENST00000482598 SMARCA2P51531 1590 aa33.61■■■□□ 2.97
PLXNA3-205ENST00000482598 MROH2BQ7Z745 1585 aa33.61■■■□□ 2.97
PLXNA3-205ENST00000482598 PEG3Q9GZU2 1588 aa33.6■■■□□ 2.97
PLXNA3-205ENST00000482598 HMGXB3Q12766 1538 aa33.5■■■□□ 2.95
PLXNA3-205ENST00000482598 BAZ1BQ9UIG0 1483 aaKnown RBP33.32■■■□□ 2.92
PLXNA3-205ENST00000482598 RSF1Q96T23 1441 aaPredicted RBP33.27■■■□□ 2.92
PLXNA3-205ENST00000482598 WIZO95785 1651 aa33.24■■■□□ 2.91
PLXNA3-205ENST00000482598 TOP2AP11388 1531 aaKnown RBP32.95■■■□□ 2.87
PLXNA3-205ENST00000482598 LAMC3Q9Y6N6 1575 aa32.72■■■□□ 2.83
PLXNA3-205ENST00000482598 NESP48681 1621 aa32.69■■■□□ 2.82
PLXNA3-205ENST00000482598 CADPSQ9ULU8 1353 aa32.59■■■□□ 2.81
PLXNA3-205ENST00000482598 CCDC88BA6NC98 1476 aa32.51■■■□□ 2.79
PLXNA3-205ENST00000482598 ERCC6Q03468 1493 aa32.49■■■□□ 2.79
PLXNA3-205ENST00000482598 CFTRP13569 1480 aa32.47■■■□□ 2.79
PLXNA3-205ENST00000482598 PDS5BQ9NTI5 1447 aa32.43■■■□□ 2.78
PLXNA3-205ENST00000482598 KIF21AQ7Z4S6 1674 aa32.37■■■□□ 2.77
PLXNA3-205ENST00000482598 SUPT5HO00267 1087 aaKnown RBP32.29■■■□□ 2.76
PLXNA3-205ENST00000482598 THOC2Q8NI27 1593 aaKnown RBP32.28■■■□□ 2.76
PLXNA3-205ENST00000482598 PRDM2Q13029 1718 aa32.28■■■□□ 2.76
PLXNA3-205ENST00000482598 CUX2O14529 1486 aa32.23■■■□□ 2.75
PLXNA3-205ENST00000482598 FANCD2Q9BXW9 1451 aa32.22■■■□□ 2.75
PLXNA3-205ENST00000482598 CEP164Q9UPV0 1460 aa32.17■■■□□ 2.74
PLXNA3-205ENST00000482598 MRC2Q9UBG0 1479 aa32.12■■■□□ 2.73
PLXNA3-205ENST00000482598 WDR62O43379 1518 aa32.06■■■□□ 2.72
PLXNA3-205ENST00000482598 URB2Q14146 1524 aaKnown RBP31.91■■■□□ 2.7
PLXNA3-205ENST00000482598 ABCC8Q09428 1581 aa31.75■■■□□ 2.67
PLXNA3-205ENST00000482598 TOPBP1Q92547 1522 aa31.74■■■□□ 2.67
PLXNA3-205ENST00000482598 DNMBPQ6XZF7 1577 aa31.73■■■□□ 2.67
PLXNA3-205ENST00000482598 CUX1P39880 1505 aa31.54■■■□□ 2.64
PLXNA3-205ENST00000482598 IFT140Q96RY7 1462 aa31.51■■■□□ 2.63
PLXNA3-205ENST00000482598 POLA1P09884 1462 aaPredicted RBP31.47■■■□□ 2.63
PLXNA3-205ENST00000482598 TARBP1Q13395 1621 aaKnown RBP31.42■■■□□ 2.62
PLXNA3-205ENST00000482598 FGD5Q6ZNL6 1462 aa31.4■■■□□ 2.62
PLXNA3-205ENST00000482598 WRNQ14191 1432 aaPredicted RBP eCLIP31.34■■■□□ 2.61
PLXNA3-205ENST00000482598 BIVM-ERCC5R4GMW8 1640 aa31.34■■■□□ 2.61
PLXNA3-205ENST00000482598 TOP2BQ02880 1626 aa31.32■■■□□ 2.6
PLXNA3-205ENST00000482598 ZNF608Q9ULD9 1512 aaPredicted RBP31.32■■■□□ 2.6
PLXNA3-205ENST00000482598 SOGA1O94964 1423 aa31.29■■■□□ 2.6
PLXNA3-205ENST00000482598 SYNJ1O43426 1573 aa31.29■■■□□ 2.6
PLXNA3-205ENST00000482598 RAD54L2Q9Y4B4 1467 aa31.28■■■□□ 2.6
PLXNA3-205ENST00000482598 EIF4G3O43432 1585 aaKnown RBP31.26■■■□□ 2.59
PLXNA3-205ENST00000482598 WDR97A6NE52 1622 aa31.24■■■□□ 2.59
PLXNA3-205ENST00000482598 ABCA10Q8WWZ4 1543 aa31.14■■■□□ 2.58
PLXNA3-205ENST00000482598 AQRO60306 1485 aaKnown RBP eCLIP31.13■■■□□ 2.574e-7■■■■□ 19.6
PLXNA3-205ENST00000482598 TDRD9Q8NDG6 1382 aaKnown RBP31.06■■■□□ 2.56
PLXNA3-205ENST00000482598 ABCA5Q8WWZ7 1642 aa31.03■■■□□ 2.56
PLXNA3-205ENST00000482598 DNAJC5Q9H3Z4 198 aa31.02■■■□□ 2.56
PLXNA3-205ENST00000482598 GRIN2BQ13224 1484 aa30.95■■■□□ 2.55
PLXNA3-205ENST00000482598 GAPVD1Q14C86 1478 aa30.95■■■□□ 2.55
PLXNA3-205ENST00000482598 PBRM1Q86U86 1689 aa30.93■■■□□ 2.54
PLXNA3-205ENST00000482598 MAGI1Q96QZ7 1491 aaPredicted RBP30.89■■■□□ 2.54
PLXNA3-205ENST00000482598 SNAPC4Q5SXM2 1469 aa30.88■■■□□ 2.53
PLXNA3-205ENST00000482598 CHD1O14646 1710 aa30.82■■■□□ 2.52
PLXNA3-205ENST00000482598 OSCARQ8IYS5 282 aa30.78■■■□□ 2.52
PLXNA3-205ENST00000482598 ERICH3Q5RHP9 1530 aa30.78■■■□□ 2.52
PLXNA3-205ENST00000482598 SYNJ2O15056 1496 aa30.76■■■□□ 2.51
PLXNA3-205ENST00000482598 ADAMTS12P58397 1594 aa30.71■■■□□ 2.51
PLXNA3-205ENST00000482598 KIF27Q86VH2 1401 aa30.67■■■□□ 2.5
PLXNA3-205ENST00000482598 FHAD1B1AJZ9 1412 aa30.62■■■□□ 2.49
PLXNA3-205ENST00000482598 FBLN2P98095 1184 aa30.6■■■□□ 2.49
PLXNA3-205ENST00000482598 CHMP7Q8WUX9 453 aaPredicted RBP30.6■■■□□ 2.49
PLXNA3-205ENST00000482598 GRIN2AQ12879 1464 aa30.57■■■□□ 2.48
PLXNA3-205ENST00000482598 TRIM41Q8WV44 630 aa30.55■■■□□ 2.48
PLXNA3-205ENST00000482598 CLASP1Q7Z460 1538 aa30.55■■■□□ 2.48
PLXNA3-205ENST00000482598 IGF1RP08069 1367 aa30.54■■■□□ 2.48
PLXNA3-205ENST00000482598 CUL7Q14999 1698 aa30.52■■■□□ 2.48
PLXNA3-205ENST00000482598 NUP160Q12769 1436 aa30.47■■■□□ 2.47
PLXNA3-205ENST00000482598 CEP170Q5SW79 1584 aa30.43■■■□□ 2.46
PLXNA3-205ENST00000482598 RUSC2Q8N2Y8 1516 aa30.4■■■□□ 2.46
PLXNA3-205ENST00000482598 ARHGEF11O15085 1522 aa30.37■■■□□ 2.45
PLXNA3-205ENST00000482598 RIMBP3CA6NJZ7 1639 aa30.36■■■□□ 2.45
PLXNA3-205ENST00000482598 RIMBP3BA6NNM3 1639 aa30.36■■■□□ 2.45
PLXNA3-205ENST00000482598 RIMBP3Q9UFD9 1639 aa30.36■■■□□ 2.45
PLXNA3-205ENST00000482598 CARMIL1Q5VZK9 1371 aa30.33■■■□□ 2.45
PLXNA3-205ENST00000482598 CHIC1Q5VXU3 224 aa30.29■■■□□ 2.44
PLXNA3-205ENST00000482598 SHROOM2Q13796 1616 aa30.25■■■□□ 2.43
PLXNA3-205ENST00000482598 EEA1Q15075 1411 aa30.2■■■□□ 2.42
PLXNA3-205ENST00000482598 RAPGEF2Q9Y4G8 1499 aa30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms