Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SCXQ7RTU7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC10.79□□□□□ -0.68
SCXQ7RTU7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC10.79□□□□□ -0.68
SCXQ7RTU7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SCXQ7RTU7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC10.79□□□□□ -0.68
SCXQ7RTU7 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC10.79□□□□□ -0.68
SCXQ7RTU7 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
SCXQ7RTU7 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
SCXQ7RTU7 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
SCXQ7RTU7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC10.79□□□□□ -0.68
SCXQ7RTU7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC10.79□□□□□ -0.68
SCXQ7RTU7 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
SCXQ7RTU7 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SCXQ7RTU7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SCXQ7RTU7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC10.78□□□□□ -0.68
SCXQ7RTU7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
SCXQ7RTU7 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC10.78□□□□□ -0.68
SCXQ7RTU7 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
SCXQ7RTU7 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SCXQ7RTU7 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SCXQ7RTU7 AL138688.1-201ENST00000624851 1594 ntBASIC10.78□□□□□ -0.68
SCXQ7RTU7 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
SCXQ7RTU7 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
SCXQ7RTU7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SCXQ7RTU7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC10.78□□□□□ -0.68
SCXQ7RTU7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SCXQ7RTU7 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SCXQ7RTU7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
SCXQ7RTU7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
SCXQ7RTU7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC10.78□□□□□ -0.68
SCXQ7RTU7 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SCXQ7RTU7 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
SCXQ7RTU7 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SCXQ7RTU7 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
SCXQ7RTU7 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SCXQ7RTU7 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
SCXQ7RTU7 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
SCXQ7RTU7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
SCXQ7RTU7 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC10.78□□□□□ -0.68
SCXQ7RTU7 AC002056.1-201ENST00000395613 760 ntBASIC10.78□□□□□ -0.68
SCXQ7RTU7 AC004461.1-201ENST00000412461 403 ntBASIC10.78□□□□□ -0.68
SCXQ7RTU7 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC10.78□□□□□ -0.68
SCXQ7RTU7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC10.78□□□□□ -0.68
SCXQ7RTU7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
SCXQ7RTU7 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC10.78□□□□□ -0.68
SCXQ7RTU7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SCXQ7RTU7 TIMM8BP1-201ENST00000452384 211 ntBASIC10.78□□□□□ -0.68
SCXQ7RTU7 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC10.78□□□□□ -0.68
SCXQ7RTU7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SCXQ7RTU7 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC10.78□□□□□ -0.68
SCXQ7RTU7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC10.78□□□□□ -0.68
SCXQ7RTU7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
SCXQ7RTU7 RPL28-209ENST00000560055 670 ntTSL 3 BASIC10.78□□□□□ -0.68
SCXQ7RTU7 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC10.78□□□□□ -0.68
SCXQ7RTU7 METTL23-205ENST00000588302 925 ntTSL 5 BASIC10.78□□□□□ -0.68
SCXQ7RTU7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC10.78□□□□□ -0.68
SCXQ7RTU7 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC10.78□□□□□ -0.68
SCXQ7RTU7 AC022145.2-201ENST00000598203 171 ntBASIC10.78□□□□□ -0.68
SCXQ7RTU7 BSG-214ENST00000614867 960 ntTSL 3 BASIC10.78□□□□□ -0.68
SCXQ7RTU7 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC10.78□□□□□ -0.68
SCXQ7RTU7 AC105339.1-204ENST00000636249 355 ntBASIC10.78□□□□□ -0.68
SCXQ7RTU7 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC10.78□□□□□ -0.68
SCXQ7RTU7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
SCXQ7RTU7 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SCXQ7RTU7 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SCXQ7RTU7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SCXQ7RTU7 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SCXQ7RTU7 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SCXQ7RTU7 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SCXQ7RTU7 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SCXQ7RTU7 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
SCXQ7RTU7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC10.78□□□□□ -0.68
SCXQ7RTU7 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
SCXQ7RTU7 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC10.78□□□□□ -0.68
SCXQ7RTU7 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
SCXQ7RTU7 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
SCXQ7RTU7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SCXQ7RTU7 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC10.78□□□□□ -0.68
SCXQ7RTU7 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SCXQ7RTU7 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC10.78□□□□□ -0.68
SCXQ7RTU7 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
SCXQ7RTU7 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SCXQ7RTU7 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC10.78□□□□□ -0.68
SCXQ7RTU7 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SCXQ7RTU7 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SCXQ7RTU7 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SCXQ7RTU7 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SCXQ7RTU7 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC10.78□□□□□ -0.68
SCXQ7RTU7 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SCXQ7RTU7 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SCXQ7RTU7 AC105917.1-201ENST00000506637 2539 ntBASIC10.78□□□□□ -0.68
SCXQ7RTU7 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SCXQ7RTU7 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.68
SCXQ7RTU7 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
SCXQ7RTU7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SCXQ7RTU7 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC10.77□□□□□ -0.68
SCXQ7RTU7 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SCXQ7RTU7 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
SCXQ7RTU7 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SCXQ7RTU7 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms