Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C11orf88Q6PI97 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 AL022342.1-201ENST00000400363 863 ntBASIC14.19□□□□□ -0.14
C11orf88Q6PI97 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 AP001005.1-201ENST00000571755 1248 ntBASIC14.19□□□□□ -0.14
C11orf88Q6PI97 BX640515.1-201ENST00000617215 977 ntBASIC14.19□□□□□ -0.14
C11orf88Q6PI97 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
C11orf88Q6PI97 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 AKR1C7P-201ENST00000305623 895 ntBASIC14.18□□□□□ -0.14
C11orf88Q6PI97 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms