Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2AP49459 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2AP49459 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2AP49459 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2AP49459 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2AP49459 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2AP49459 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2AP49459 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2AP49459 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
UBE2AP49459 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2AP49459 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2AP49459 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2AP49459 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC10.33□□□□□ -0.76
UBE2AP49459 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2AP49459 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC10.33□□□□□ -0.76
UBE2AP49459 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
UBE2AP49459 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
UBE2AP49459 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2AP49459 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2AP49459 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC10.33□□□□□ -0.76
UBE2AP49459 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2AP49459 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2AP49459 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
UBE2AP49459 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
UBE2AP49459 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2AP49459 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC10.32□□□□□ -0.76
UBE2AP49459 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2AP49459 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2AP49459 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2AP49459 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2AP49459 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2AP49459 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2AP49459 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2AP49459 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2AP49459 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2AP49459 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2AP49459 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
UBE2AP49459 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC10.32□□□□□ -0.76
UBE2AP49459 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
UBE2AP49459 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
UBE2AP49459 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC10.32□□□□□ -0.76
UBE2AP49459 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
UBE2AP49459 ABR-203ENST00000536794 2213 ntTSL 2 BASIC10.32□□□□□ -0.76
UBE2AP49459 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2AP49459 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC10.32□□□□□ -0.76
UBE2AP49459 AL450487.1-201ENST00000426799 995 ntBASIC10.32□□□□□ -0.76
UBE2AP49459 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
UBE2AP49459 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC10.32□□□□□ -0.76
UBE2AP49459 UNC93B7-201ENST00000509439 705 ntBASIC10.32□□□□□ -0.76
UBE2AP49459 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
UBE2AP49459 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC10.32□□□□□ -0.76
UBE2AP49459 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC10.32□□□□□ -0.76
UBE2AP49459 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
UBE2AP49459 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC10.32□□□□□ -0.76
UBE2AP49459 WT1-AS_2.1-201ENST00000613208 137 ntBASIC10.32□□□□□ -0.76
UBE2AP49459 IRF5-214ENST00000613821 595 ntTSL 5 BASIC10.32□□□□□ -0.76
UBE2AP49459 AL773604.1-201ENST00000617417 272 ntBASIC10.32□□□□□ -0.76
UBE2AP49459 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
UBE2AP49459 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2AP49459 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2AP49459 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC10.32□□□□□ -0.76
UBE2AP49459 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC10.32□□□□□ -0.76
UBE2AP49459 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC10.32□□□□□ -0.76
UBE2AP49459 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2AP49459 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2AP49459 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2AP49459 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2AP49459 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
UBE2AP49459 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2AP49459 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2AP49459 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2AP49459 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC10.32□□□□□ -0.76
UBE2AP49459 AC012569.1-201ENST00000591191 1524 ntBASIC10.32□□□□□ -0.76
UBE2AP49459 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2AP49459 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2AP49459 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2AP49459 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2AP49459 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2AP49459 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
UBE2AP49459 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2AP49459 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2AP49459 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2AP49459 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2AP49459 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2AP49459 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2AP49459 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
UBE2AP49459 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2AP49459 AC092364.2-201ENST00000596710 2692 ntBASIC10.31□□□□□ -0.76
UBE2AP49459 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2AP49459 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2AP49459 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2AP49459 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
UBE2AP49459 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC10.31□□□□□ -0.76
UBE2AP49459 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2AP49459 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
UBE2AP49459 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
UBE2AP49459 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2AP49459 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2AP49459 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2AP49459 PC-214ENST00000628663 1470 ntTSL 5 BASIC10.31□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms