Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
UBE2AP49459 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBE2AP49459 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
UBE2AP49459 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBE2AP49459 AL356512.1-201ENST00000607453 1739 ntBASIC20.4■□□□□ 0.86
UBE2AP49459 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
UBE2AP49459 HES6-203ENST00000409160 1600 ntTSL 2 BASIC20.27■□□□□ 0.84
UBE2AP49459 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC20.2■□□□□ 0.82
UBE2AP49459 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBE2AP49459 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
UBE2AP49459 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC20.03■□□□□ 0.8
UBE2AP49459 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBE2AP49459 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBE2AP49459 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC19.92■□□□□ 0.78
UBE2AP49459 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
UBE2AP49459 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBE2AP49459 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC19.67■□□□□ 0.74
UBE2AP49459 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBE2AP49459 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
UBE2AP49459 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBE2AP49459 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBE2AP49459 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBE2AP49459 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBE2AP49459 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBE2AP49459 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
UBE2AP49459 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC19.3■□□□□ 0.68
UBE2AP49459 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBE2AP49459 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
UBE2AP49459 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
UBE2AP49459 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE2AP49459 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
UBE2AP49459 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2AP49459 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC19.11■□□□□ 0.65
UBE2AP49459 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2AP49459 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2AP49459 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBE2AP49459 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
UBE2AP49459 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
UBE2AP49459 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
UBE2AP49459 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UBE2AP49459 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
UBE2AP49459 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC18.99■□□□□ 0.63
UBE2AP49459 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2AP49459 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE2AP49459 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBE2AP49459 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
UBE2AP49459 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC18.91■□□□□ 0.62
UBE2AP49459 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBE2AP49459 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBE2AP49459 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC18.88■□□□□ 0.61
UBE2AP49459 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
UBE2AP49459 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
UBE2AP49459 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBE2AP49459 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC18.85■□□□□ 0.61
UBE2AP49459 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC18.78■□□□□ 0.6
UBE2AP49459 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE2AP49459 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC18.74■□□□□ 0.59
UBE2AP49459 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBE2AP49459 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC18.67■□□□□ 0.58
UBE2AP49459 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
UBE2AP49459 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
UBE2AP49459 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC18.58■□□□□ 0.56
UBE2AP49459 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE2AP49459 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
UBE2AP49459 ILK-212ENST00000532063 1617 ntTSL 2 BASIC18.47■□□□□ 0.55
UBE2AP49459 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBE2AP49459 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBE2AP49459 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBE2AP49459 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UBE2AP49459 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBE2AP49459 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC18.4■□□□□ 0.54
UBE2AP49459 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC18.4■□□□□ 0.54
UBE2AP49459 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2AP49459 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2AP49459 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBE2AP49459 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBE2AP49459 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBE2AP49459 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBE2AP49459 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC18.32■□□□□ 0.52
UBE2AP49459 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBE2AP49459 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
UBE2AP49459 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBE2AP49459 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBE2AP49459 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBE2AP49459 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC18.27■□□□□ 0.52
UBE2AP49459 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
UBE2AP49459 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UBE2AP49459 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UBE2AP49459 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBE2AP49459 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBE2AP49459 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UBE2AP49459 INO80B-203ENST00000409917 796 ntTSL 2 BASIC18.18■□□□□ 0.5
UBE2AP49459 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UBE2AP49459 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBE2AP49459 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
UBE2AP49459 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2AP49459 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
UBE2AP49459 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
UBE2AP49459 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
UBE2AP49459 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 8.2 ms