Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.25■□□□□ 0.19
CRLF3Q8IUI8 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CRLF3Q8IUI8 AC023157.3-201ENST00000619086 2088 ntBASIC16.25■□□□□ 0.19
CRLF3Q8IUI8 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CRLF3Q8IUI8 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.25■□□□□ 0.19
CRLF3Q8IUI8 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.25■□□□□ 0.19
CRLF3Q8IUI8 AC016027.1-202ENST00000607927 1699 ntBASIC16.25■□□□□ 0.19
CRLF3Q8IUI8 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CRLF3Q8IUI8 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CRLF3Q8IUI8 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.25■□□□□ 0.19
CRLF3Q8IUI8 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CRLF3Q8IUI8 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CRLF3Q8IUI8 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.25■□□□□ 0.19
CRLF3Q8IUI8 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.25■□□□□ 0.19
CRLF3Q8IUI8 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.25■□□□□ 0.19
CRLF3Q8IUI8 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.25■□□□□ 0.19
CRLF3Q8IUI8 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.25■□□□□ 0.19
CRLF3Q8IUI8 AC012640.2-201ENST00000561606 901 ntBASIC16.25■□□□□ 0.19
CRLF3Q8IUI8 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.25■□□□□ 0.19
CRLF3Q8IUI8 AC091167.2-201ENST00000579581 588 ntBASIC16.25■□□□□ 0.19
CRLF3Q8IUI8 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CRLF3Q8IUI8 AL022326.1-202ENST00000641533 845 ntBASIC16.25■□□□□ 0.19
CRLF3Q8IUI8 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CRLF3Q8IUI8 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CRLF3Q8IUI8 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CRLF3Q8IUI8 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CRLF3Q8IUI8 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CRLF3Q8IUI8 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CRLF3Q8IUI8 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CRLF3Q8IUI8 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CRLF3Q8IUI8 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.25■□□□□ 0.19
CRLF3Q8IUI8 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CRLF3Q8IUI8 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
CRLF3Q8IUI8 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.25■□□□□ 0.19
CRLF3Q8IUI8 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CRLF3Q8IUI8 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CRLF3Q8IUI8 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 AL671883.3-201ENST00000603274 991 ntBASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 AC107918.4-202ENST00000641623 219 ntBASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 NCF1C-201ENST00000438382 1427 ntBASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CRLF3Q8IUI8 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
CRLF3Q8IUI8 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CRLF3Q8IUI8 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
CRLF3Q8IUI8 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.23■□□□□ 0.19
CRLF3Q8IUI8 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
CRLF3Q8IUI8 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CRLF3Q8IUI8 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CRLF3Q8IUI8 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CRLF3Q8IUI8 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.23■□□□□ 0.19
CRLF3Q8IUI8 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.23■□□□□ 0.19
CRLF3Q8IUI8 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CRLF3Q8IUI8 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CRLF3Q8IUI8 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.23■□□□□ 0.19
CRLF3Q8IUI8 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.23■□□□□ 0.19
CRLF3Q8IUI8 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.23■□□□□ 0.19
CRLF3Q8IUI8 RPL13AP23-201ENST00000480739 586 ntBASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms