Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 FAM207CP-201ENST00000443486 507 ntBASIC14.67□□□□□ -0.06
FREM3P0C091 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.67□□□□□ -0.06
FREM3P0C091 AL158211.3-201ENST00000607385 239 ntBASIC14.67□□□□□ -0.06
FREM3P0C091 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
FREM3P0C091 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC14.67□□□□□ -0.06
FREM3P0C091 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
FREM3P0C091 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
FREM3P0C091 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
FREM3P0C091 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
FREM3P0C091 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
FREM3P0C091 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
FREM3P0C091 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
FREM3P0C091 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
FREM3P0C091 CETN4P-206ENST00000642099 2168 ntBASIC14.67□□□□□ -0.06
FREM3P0C091 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
FREM3P0C091 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.67□□□□□ -0.06
FREM3P0C091 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.67□□□□□ -0.06
FREM3P0C091 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
FREM3P0C091 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
FREM3P0C091 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
FREM3P0C091 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.66□□□□□ -0.06
FREM3P0C091 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
FREM3P0C091 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
FREM3P0C091 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
FREM3P0C091 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FREM3P0C091 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.66□□□□□ -0.06
FREM3P0C091 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
FREM3P0C091 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.66□□□□□ -0.06
FREM3P0C091 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.66□□□□□ -0.06
FREM3P0C091 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.66□□□□□ -0.06
FREM3P0C091 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
FREM3P0C091 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
FREM3P0C091 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
FREM3P0C091 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.66□□□□□ -0.06
FREM3P0C091 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.66□□□□□ -0.06
FREM3P0C091 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FREM3P0C091 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
FREM3P0C091 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FREM3P0C091 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
FREM3P0C091 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.66□□□□□ -0.06
FREM3P0C091 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FREM3P0C091 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.66□□□□□ -0.06
FREM3P0C091 PKD1P1-201ENST00000458669 6805 ntBASIC14.66□□□□□ -0.06
FREM3P0C091 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FREM3P0C091 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.66□□□□□ -0.06
FREM3P0C091 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
FREM3P0C091 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
FREM3P0C091 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
FREM3P0C091 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FREM3P0C091 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.66□□□□□ -0.06
FREM3P0C091 AC007950.2-201ENST00000615045 2347 ntBASIC14.66□□□□□ -0.06
FREM3P0C091 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.66□□□□□ -0.06
FREM3P0C091 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
FREM3P0C091 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
FREM3P0C091 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.66□□□□□ -0.06
FREM3P0C091 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FREM3P0C091 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.66□□□□□ -0.06
FREM3P0C091 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.66□□□□□ -0.06
FREM3P0C091 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.66□□□□□ -0.06
FREM3P0C091 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.66□□□□□ -0.06
FREM3P0C091 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.66□□□□□ -0.06
FREM3P0C091 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.66□□□□□ -0.06
FREM3P0C091 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.66□□□□□ -0.06
FREM3P0C091 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
FREM3P0C091 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FREM3P0C091 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
FREM3P0C091 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
FREM3P0C091 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.66□□□□□ -0.06
FREM3P0C091 RN7SL828P-201ENST00000607615 303 ntBASIC14.66□□□□□ -0.06
FREM3P0C091 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
FREM3P0C091 AL592424.1-201ENST00000563624 1536 ntBASIC14.66□□□□□ -0.06
FREM3P0C091 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
FREM3P0C091 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FREM3P0C091 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FREM3P0C091 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
FREM3P0C091 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
FREM3P0C091 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.66□□□□□ -0.06
FREM3P0C091 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
FREM3P0C091 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FREM3P0C091 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
FREM3P0C091 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.66□□□□□ -0.06
FREM3P0C091 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FREM3P0C091 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
FREM3P0C091 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.66□□□□□ -0.06
FREM3P0C091 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.66□□□□□ -0.06
FREM3P0C091 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
FREM3P0C091 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
FREM3P0C091 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
FREM3P0C091 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
FREM3P0C091 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
FREM3P0C091 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
FREM3P0C091 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
FREM3P0C091 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.65□□□□□ -0.06
FREM3P0C091 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
FREM3P0C091 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
FREM3P0C091 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
FREM3P0C091 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
FREM3P0C091 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
FREM3P0C091 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
FREM3P0C091 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms