Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQB1P01920 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
HLA-DQB1P01920 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQB1P01920 FAM86EP-206ENST00000510506 987 ntBASIC14.01□□□□□ -0.17
HLA-DQB1P01920 AC096582.2-201ENST00000510860 516 ntBASIC14.01□□□□□ -0.17
HLA-DQB1P01920 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC14.01□□□□□ -0.17
HLA-DQB1P01920 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQB1P01920 TPSP2-201ENST00000561760 610 ntBASIC14.01□□□□□ -0.17
HLA-DQB1P01920 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.01□□□□□ -0.17
HLA-DQB1P01920 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
HLA-DQB1P01920 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
HLA-DQB1P01920 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.01□□□□□ -0.17
HLA-DQB1P01920 AL359183.1-201ENST00000623796 2132 ntBASIC14.01□□□□□ -0.17
HLA-DQB1P01920 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.01□□□□□ -0.17
HLA-DQB1P01920 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQB1P01920 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQB1P01920 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQB1P01920 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQB1P01920 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQB1P01920 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQB1P01920 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.01□□□□□ -0.17
HLA-DQB1P01920 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
HLA-DQB1P01920 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQB1P01920 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQB1P01920 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.01□□□□□ -0.17
HLA-DQB1P01920 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQB1P01920 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQB1P01920 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQB1P01920 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQB1P01920 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DQB1P01920 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.01□□□□□ -0.17
HLA-DQB1P01920 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQB1P01920 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQB1P01920 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQB1P01920 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
HLA-DQB1P01920 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQB1P01920 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQB1P01920 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
HLA-DQB1P01920 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQB1P01920 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQB1P01920 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQB1P01920 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQB1P01920 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQB1P01920 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14□□□□□ -0.17
HLA-DQB1P01920 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQB1P01920 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQB1P01920 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQB1P01920 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQB1P01920 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQB1P01920 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQB1P01920 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQB1P01920 POM121L3P-201ENST00000419331 1163 ntBASIC14□□□□□ -0.17
HLA-DQB1P01920 IGHV3-47-201ENST00000425060 335 ntBASIC14□□□□□ -0.17
HLA-DQB1P01920 PRYP5-201ENST00000451909 266 ntBASIC14□□□□□ -0.17
HLA-DQB1P01920 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14□□□□□ -0.17
HLA-DQB1P01920 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
HLA-DQB1P01920 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14□□□□□ -0.17
HLA-DQB1P01920 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
HLA-DQB1P01920 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14□□□□□ -0.17
HLA-DQB1P01920 AC116407.4-201ENST00000623319 1061 ntBASIC14□□□□□ -0.17
HLA-DQB1P01920 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14□□□□□ -0.17
HLA-DQB1P01920 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQB1P01920 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQB1P01920 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQB1P01920 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQB1P01920 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQB1P01920 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQB1P01920 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
HLA-DQB1P01920 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQB1P01920 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQB1P01920 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQB1P01920 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
HLA-DQB1P01920 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQB1P01920 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DQB1P01920 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14□□□□□ -0.17
HLA-DQB1P01920 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
HLA-DQB1P01920 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.99□□□□□ -0.17
HLA-DQB1P01920 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
HLA-DQB1P01920 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
HLA-DQB1P01920 NCF1C-201ENST00000438382 1427 ntBASIC13.99□□□□□ -0.17
HLA-DQB1P01920 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.99□□□□□ -0.17
HLA-DQB1P01920 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DQB1P01920 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
HLA-DQB1P01920 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DQB1P01920 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DQB1P01920 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
HLA-DQB1P01920 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DQB1P01920 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DQB1P01920 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DQB1P01920 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC13.99□□□□□ -0.17
HLA-DQB1P01920 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DQB1P01920 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.99□□□□□ -0.17
HLA-DQB1P01920 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
HLA-DQB1P01920 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DQB1P01920 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DQB1P01920 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DQB1P01920 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DQB1P01920 TOB2P1-201ENST00000469761 992 ntBASIC13.99□□□□□ -0.17
HLA-DQB1P01920 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.99□□□□□ -0.17
HLA-DQB1P01920 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms