Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 PMS2P4-201ENST00000412466 1052 ntBASIC15.05■□□□□ -0
CHMP1BQ7LBR1 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CHMP1BQ7LBR1 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.05■□□□□ -0
CHMP1BQ7LBR1 CNN2P11-201ENST00000429351 262 ntBASIC15.05■□□□□ -0
CHMP1BQ7LBR1 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
CHMP1BQ7LBR1 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.05■□□□□ -0
CHMP1BQ7LBR1 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.05■□□□□ -0
CHMP1BQ7LBR1 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
CHMP1BQ7LBR1 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
CHMP1BQ7LBR1 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CHMP1BQ7LBR1 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CHMP1BQ7LBR1 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
CHMP1BQ7LBR1 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CHMP1BQ7LBR1 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CHMP1BQ7LBR1 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
CHMP1BQ7LBR1 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CHMP1BQ7LBR1 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.05■□□□□ -0
CHMP1BQ7LBR1 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.05■□□□□ -0
CHMP1BQ7LBR1 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.05■□□□□ -0
CHMP1BQ7LBR1 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CHMP1BQ7LBR1 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
CHMP1BQ7LBR1 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.05■□□□□ -0
CHMP1BQ7LBR1 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CHMP1BQ7LBR1 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CHMP1BQ7LBR1 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CHMP1BQ7LBR1 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.05■□□□□ -0
CHMP1BQ7LBR1 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.05■□□□□ -0
CHMP1BQ7LBR1 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CHMP1BQ7LBR1 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.05■□□□□ -0
CHMP1BQ7LBR1 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
CHMP1BQ7LBR1 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CHMP1BQ7LBR1 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CHMP1BQ7LBR1 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 AC026691.1-201ENST00000602502 2017 ntBASIC15.04■□□□□ -0
CHMP1BQ7LBR1 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 AP006288.1-201ENST00000446065 395 ntBASIC15.04■□□□□ -0
CHMP1BQ7LBR1 SPDYE11-202ENST00000450699 704 ntBASIC15.04■□□□□ -0
CHMP1BQ7LBR1 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 SPDYE9P-201ENST00000570642 692 ntBASIC15.04■□□□□ -0
CHMP1BQ7LBR1 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 AP001160.2-201ENST00000596071 487 ntBASIC15.04■□□□□ -0
CHMP1BQ7LBR1 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 AL031055.1-201ENST00000606362 631 ntBASIC15.04■□□□□ -0
CHMP1BQ7LBR1 SPDYE10P-202ENST00000612005 668 ntBASIC15.04■□□□□ -0
CHMP1BQ7LBR1 SPDYE8P-202ENST00000612377 668 ntBASIC15.04■□□□□ -0
CHMP1BQ7LBR1 AC092902.6-201ENST00000641783 218 ntBASIC15.04■□□□□ -0
CHMP1BQ7LBR1 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 AC007950.2-201ENST00000615045 2347 ntBASIC15.04■□□□□ -0
CHMP1BQ7LBR1 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.04■□□□□ -0
CHMP1BQ7LBR1 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.03■□□□□ -0
CHMP1BQ7LBR1 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHMP1BQ7LBR1 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CHMP1BQ7LBR1 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.03■□□□□ -0
CHMP1BQ7LBR1 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.03■□□□□ -0
CHMP1BQ7LBR1 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.03■□□□□ -0
CHMP1BQ7LBR1 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.03■□□□□ -0
CHMP1BQ7LBR1 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHMP1BQ7LBR1 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.03■□□□□ -0
CHMP1BQ7LBR1 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHMP1BQ7LBR1 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
CHMP1BQ7LBR1 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHMP1BQ7LBR1 OR2I1P-209ENST00000641730 5365 ntBASIC15.03■□□□□ -0
CHMP1BQ7LBR1 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms