Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 AC136632.2-201ENST00000512891 861 ntBASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 AC092364.2-201ENST00000596710 2692 ntBASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.97□□□□□ -0.01
TMEM53Q6P2H8 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 ELK2BP-201ENST00000415014 1224 ntBASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 AL031284.1-201ENST00000419297 478 ntBASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 AP001005.1-201ENST00000571755 1248 ntBASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 AC005593.1-201ENST00000624894 515 ntBASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 FAM215A-202ENST00000632077 792 ntBASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 AL805961.1-202ENST00000641562 540 ntBASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM53Q6P2H8 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TMEM53Q6P2H8 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TMEM53Q6P2H8 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.96□□□□□ -0.02
TMEM53Q6P2H8 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TMEM53Q6P2H8 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TMEM53Q6P2H8 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.96□□□□□ -0.02
TMEM53Q6P2H8 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
TMEM53Q6P2H8 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
TMEM53Q6P2H8 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.95□□□□□ -0.02
TMEM53Q6P2H8 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.95□□□□□ -0.02
TMEM53Q6P2H8 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TMEM53Q6P2H8 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TMEM53Q6P2H8 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TMEM53Q6P2H8 AC006504.4-201ENST00000592118 1568 ntBASIC14.95□□□□□ -0.02
TMEM53Q6P2H8 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TMEM53Q6P2H8 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TMEM53Q6P2H8 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.95□□□□□ -0.02
TMEM53Q6P2H8 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TMEM53Q6P2H8 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
TMEM53Q6P2H8 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.95□□□□□ -0.02
TMEM53Q6P2H8 AP002414.1-201ENST00000391405 1147 ntBASIC14.95□□□□□ -0.02
TMEM53Q6P2H8 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.95□□□□□ -0.02
TMEM53Q6P2H8 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.95□□□□□ -0.02
TMEM53Q6P2H8 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms