Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CHRFAM7AQ494W8 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHRFAM7AQ494W8 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHRFAM7AQ494W8 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHRFAM7AQ494W8 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CHRFAM7AQ494W8 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.28□□□□□ -0.12
CHRFAM7AQ494W8 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.28□□□□□ -0.12
CHRFAM7AQ494W8 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CHRFAM7AQ494W8 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CHRFAM7AQ494W8 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHRFAM7AQ494W8 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CHRFAM7AQ494W8 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CHRFAM7AQ494W8 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.28□□□□□ -0.12
CHRFAM7AQ494W8 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHRFAM7AQ494W8 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.28□□□□□ -0.12
CHRFAM7AQ494W8 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CHRFAM7AQ494W8 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.28□□□□□ -0.12
CHRFAM7AQ494W8 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CHRFAM7AQ494W8 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CHRFAM7AQ494W8 HLA-J-202ENST00000469281 1241 ntBASIC14.28□□□□□ -0.12
CHRFAM7AQ494W8 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.28□□□□□ -0.12
CHRFAM7AQ494W8 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.28□□□□□ -0.12
CHRFAM7AQ494W8 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
CHRFAM7AQ494W8 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.28□□□□□ -0.12
CHRFAM7AQ494W8 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CHRFAM7AQ494W8 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.28□□□□□ -0.12
CHRFAM7AQ494W8 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CHRFAM7AQ494W8 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.28□□□□□ -0.12
CHRFAM7AQ494W8 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.28□□□□□ -0.12
CHRFAM7AQ494W8 AC010507.1-201ENST00000633895 436 ntBASIC14.28□□□□□ -0.12
CHRFAM7AQ494W8 MTHFR-217ENST00000641820 1569 ntBASIC14.28□□□□□ -0.12
CHRFAM7AQ494W8 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHRFAM7AQ494W8 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CHRFAM7AQ494W8 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHRFAM7AQ494W8 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
CHRFAM7AQ494W8 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHRFAM7AQ494W8 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CHRFAM7AQ494W8 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.27□□□□□ -0.12
CHRFAM7AQ494W8 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CHRFAM7AQ494W8 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
CHRFAM7AQ494W8 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.27□□□□□ -0.12
CHRFAM7AQ494W8 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CHRFAM7AQ494W8 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CHRFAM7AQ494W8 ME2P1-201ENST00000426028 1970 ntBASIC14.27□□□□□ -0.12
CHRFAM7AQ494W8 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CHRFAM7AQ494W8 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
CHRFAM7AQ494W8 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CHRFAM7AQ494W8 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.27□□□□□ -0.12
CHRFAM7AQ494W8 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CHRFAM7AQ494W8 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CHRFAM7AQ494W8 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.27□□□□□ -0.12
CHRFAM7AQ494W8 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CHRFAM7AQ494W8 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.27□□□□□ -0.12
CHRFAM7AQ494W8 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CHRFAM7AQ494W8 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
CHRFAM7AQ494W8 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CHRFAM7AQ494W8 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CHRFAM7AQ494W8 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CHRFAM7AQ494W8 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHRFAM7AQ494W8 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHRFAM7AQ494W8 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHRFAM7AQ494W8 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CHRFAM7AQ494W8 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.27□□□□□ -0.13
CHRFAM7AQ494W8 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.27□□□□□ -0.13
CHRFAM7AQ494W8 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.27□□□□□ -0.13
CHRFAM7AQ494W8 AC005034.1-201ENST00000426657 489 ntBASIC14.27□□□□□ -0.13
CHRFAM7AQ494W8 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.27□□□□□ -0.13
CHRFAM7AQ494W8 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.27□□□□□ -0.13
CHRFAM7AQ494W8 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHRFAM7AQ494W8 SIGLEC30P-201ENST00000455569 941 ntBASIC14.27□□□□□ -0.13
CHRFAM7AQ494W8 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CHRFAM7AQ494W8 AC069262.1-201ENST00000539058 672 ntBASIC14.27□□□□□ -0.13
CHRFAM7AQ494W8 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CHRFAM7AQ494W8 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.27□□□□□ -0.13
CHRFAM7AQ494W8 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.27□□□□□ -0.13
CHRFAM7AQ494W8 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CHRFAM7AQ494W8 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHRFAM7AQ494W8 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHRFAM7AQ494W8 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.27□□□□□ -0.13
CHRFAM7AQ494W8 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CHRFAM7AQ494W8 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHRFAM7AQ494W8 AL365203.3-201ENST00000609742 2057 ntBASIC14.27□□□□□ -0.13
CHRFAM7AQ494W8 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHRFAM7AQ494W8 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHRFAM7AQ494W8 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CHRFAM7AQ494W8 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHRFAM7AQ494W8 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CHRFAM7AQ494W8 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CHRFAM7AQ494W8 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CHRFAM7AQ494W8 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CHRFAM7AQ494W8 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms