Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
THBS4P35443 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
THBS4P35443 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.31□□□□□ -0.12
THBS4P35443 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
THBS4P35443 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
THBS4P35443 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
THBS4P35443 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
THBS4P35443 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
THBS4P35443 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
THBS4P35443 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
THBS4P35443 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.31□□□□□ -0.12
THBS4P35443 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
THBS4P35443 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
THBS4P35443 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.31□□□□□ -0.12
THBS4P35443 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.31□□□□□ -0.12
THBS4P35443 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
THBS4P35443 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
THBS4P35443 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
THBS4P35443 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
THBS4P35443 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.3□□□□□ -0.12
THBS4P35443 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
THBS4P35443 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.3□□□□□ -0.12
THBS4P35443 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.3□□□□□ -0.12
THBS4P35443 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
THBS4P35443 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
THBS4P35443 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
THBS4P35443 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
THBS4P35443 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
THBS4P35443 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
THBS4P35443 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.3□□□□□ -0.12
THBS4P35443 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
THBS4P35443 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
THBS4P35443 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
THBS4P35443 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.3□□□□□ -0.12
THBS4P35443 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
THBS4P35443 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
THBS4P35443 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
THBS4P35443 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.3□□□□□ -0.12
THBS4P35443 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.3□□□□□ -0.12
THBS4P35443 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.3□□□□□ -0.12
THBS4P35443 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
THBS4P35443 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
THBS4P35443 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
THBS4P35443 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.3□□□□□ -0.12
THBS4P35443 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
THBS4P35443 PKD1P5-201ENST00000532415 10291 ntBASIC14.3□□□□□ -0.12
THBS4P35443 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
THBS4P35443 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
THBS4P35443 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
THBS4P35443 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
THBS4P35443 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
THBS4P35443 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
THBS4P35443 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
THBS4P35443 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
THBS4P35443 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
THBS4P35443 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
THBS4P35443 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.3□□□□□ -0.12
THBS4P35443 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.29□□□□□ -0.12
THBS4P35443 AC132872.4-202ENST00000622924 2756 ntBASIC14.29□□□□□ -0.12
THBS4P35443 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
THBS4P35443 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.29□□□□□ -0.12
THBS4P35443 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
THBS4P35443 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
THBS4P35443 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
THBS4P35443 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
THBS4P35443 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
THBS4P35443 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
THBS4P35443 AL603832.2-201ENST00000566195 2125 ntBASIC14.29□□□□□ -0.12
THBS4P35443 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
THBS4P35443 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
THBS4P35443 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
THBS4P35443 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
THBS4P35443 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
THBS4P35443 AC024909.3-201ENST00000611513 2257 ntBASIC14.29□□□□□ -0.12
THBS4P35443 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
THBS4P35443 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.29□□□□□ -0.12
THBS4P35443 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
THBS4P35443 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
THBS4P35443 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
THBS4P35443 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
THBS4P35443 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.29□□□□□ -0.12
THBS4P35443 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.29□□□□□ -0.12
THBS4P35443 PMS2P2-201ENST00000425039 1128 ntBASIC14.29□□□□□ -0.12
THBS4P35443 SPCS2P4-201ENST00000436160 681 ntBASIC14.29□□□□□ -0.12
THBS4P35443 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.29□□□□□ -0.12
THBS4P35443 IGHV3-62-201ENST00000520057 340 ntBASIC14.29□□□□□ -0.12
THBS4P35443 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.29□□□□□ -0.12
THBS4P35443 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.29□□□□□ -0.12
THBS4P35443 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
THBS4P35443 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
THBS4P35443 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.29□□□□□ -0.12
THBS4P35443 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
THBS4P35443 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
THBS4P35443 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
THBS4P35443 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
THBS4P35443 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
THBS4P35443 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.29□□□□□ -0.12
THBS4P35443 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.29□□□□□ -0.12
THBS4P35443 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
THBS4P35443 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms