Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.42□□□□□ -0.1
HOXC12P31275 AC007274.1-201ENST00000439805 662 ntBASIC14.42□□□□□ -0.1
HOXC12P31275 AC125807.1-201ENST00000483097 614 ntBASIC14.42□□□□□ -0.1
HOXC12P31275 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.42□□□□□ -0.1
HOXC12P31275 AP005018.1-201ENST00000525475 301 ntBASIC14.42□□□□□ -0.1
HOXC12P31275 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HOXC12P31275 SLC25A39P2-201ENST00000537614 270 ntBASIC14.42□□□□□ -0.1
HOXC12P31275 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.42□□□□□ -0.1
HOXC12P31275 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.42□□□□□ -0.1
HOXC12P31275 AL008721.1-201ENST00000609964 604 ntBASIC14.42□□□□□ -0.1
HOXC12P31275 AL358472.5-202ENST00000641448 1267 ntBASIC14.42□□□□□ -0.1
HOXC12P31275 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC12P31275 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC12P31275 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC12P31275 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.42□□□□□ -0.1
HOXC12P31275 FO538757.1-201ENST00000623083 1397 ntBASIC14.42□□□□□ -0.1
HOXC12P31275 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.42□□□□□ -0.1
HOXC12P31275 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC12P31275 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
HOXC12P31275 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC12P31275 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.42□□□□□ -0.1
HOXC12P31275 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.42□□□□□ -0.1
HOXC12P31275 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC12P31275 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC12P31275 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC12P31275 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HOXC12P31275 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HOXC12P31275 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC12P31275 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC12P31275 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
HOXC12P31275 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.41□□□□□ -0.1
HOXC12P31275 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC12P31275 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.41□□□□□ -0.1
HOXC12P31275 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC12P31275 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC12P31275 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.41□□□□□ -0.1
HOXC12P31275 LINC01144-201ENST00000626198 1710 ntBASIC14.41□□□□□ -0.1
HOXC12P31275 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC12P31275 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
HOXC12P31275 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.41□□□□□ -0.1
HOXC12P31275 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.41□□□□□ -0.1
HOXC12P31275 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC12P31275 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC12P31275 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC12P31275 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
HOXC12P31275 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC12P31275 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC12P31275 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC12P31275 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.41□□□□□ -0.1
HOXC12P31275 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
HOXC12P31275 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.41□□□□□ -0.1
HOXC12P31275 SPDYE7P-202ENST00000420373 878 ntBASIC14.41□□□□□ -0.1
HOXC12P31275 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.41□□□□□ -0.1
HOXC12P31275 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.41□□□□□ -0.1
HOXC12P31275 RBPMS2P1-201ENST00000437762 623 ntBASIC14.41□□□□□ -0.1
HOXC12P31275 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.41□□□□□ -0.1
HOXC12P31275 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.41□□□□□ -0.1
HOXC12P31275 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.41□□□□□ -0.1
HOXC12P31275 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.41□□□□□ -0.1
HOXC12P31275 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.41□□□□□ -0.1
HOXC12P31275 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.41□□□□□ -0.1
HOXC12P31275 AP000842.3-202ENST00000569238 1080 ntBASIC14.41□□□□□ -0.1
HOXC12P31275 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC12P31275 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.41□□□□□ -0.1
HOXC12P31275 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.41□□□□□ -0.1
HOXC12P31275 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
HOXC12P31275 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.41□□□□□ -0.1
HOXC12P31275 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC12P31275 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC12P31275 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
HOXC12P31275 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC12P31275 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.41□□□□□ -0.1
HOXC12P31275 AC073439.1-201ENST00000624121 1774 ntBASIC14.41□□□□□ -0.1
HOXC12P31275 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
HOXC12P31275 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC12P31275 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC12P31275 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC12P31275 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC12P31275 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC12P31275 AL161772.1-201ENST00000610494 4412 ntBASIC14.41□□□□□ -0.1
HOXC12P31275 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC12P31275 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HOXC12P31275 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC12P31275 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC12P31275 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC12P31275 AC106886.4-201ENST00000623557 2502 ntBASIC14.41□□□□□ -0.1
HOXC12P31275 AC080080.1-201ENST00000625121 2420 ntBASIC14.41□□□□□ -0.1
HOXC12P31275 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
HOXC12P31275 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC12P31275 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.41□□□□□ -0.1
HOXC12P31275 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC12P31275 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HOXC12P31275 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXC12P31275 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXC12P31275 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXC12P31275 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXC12P31275 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXC12P31275 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
HOXC12P31275 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXC12P31275 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms