Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
NECTIN4Q96NY8 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
NECTIN4Q96NY8 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
NECTIN4Q96NY8 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
NECTIN4Q96NY8 DRD5P2-201ENST00000421395 2012 ntBASIC24.74■■□□□ 1.55
NECTIN4Q96NY8 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
NECTIN4Q96NY8 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.73■■□□□ 1.55
NECTIN4Q96NY8 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
NECTIN4Q96NY8 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
NECTIN4Q96NY8 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC24.72■■□□□ 1.55
NECTIN4Q96NY8 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
NECTIN4Q96NY8 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
NECTIN4Q96NY8 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
NECTIN4Q96NY8 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
NECTIN4Q96NY8 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC24.72■■□□□ 1.55
NECTIN4Q96NY8 AF131216.4-201ENST00000638924 1588 ntBASIC24.71■■□□□ 1.55
NECTIN4Q96NY8 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
NECTIN4Q96NY8 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.71■■□□□ 1.55
NECTIN4Q96NY8 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
NECTIN4Q96NY8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
NECTIN4Q96NY8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.7■■□□□ 1.55
NECTIN4Q96NY8 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.55
NECTIN4Q96NY8 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC24.7■■□□□ 1.54
NECTIN4Q96NY8 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
NECTIN4Q96NY8 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
NECTIN4Q96NY8 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
NECTIN4Q96NY8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
NECTIN4Q96NY8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
NECTIN4Q96NY8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
NECTIN4Q96NY8 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.69■■□□□ 1.54
NECTIN4Q96NY8 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
NECTIN4Q96NY8 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
NECTIN4Q96NY8 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
NECTIN4Q96NY8 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.68■■□□□ 1.54
NECTIN4Q96NY8 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
NECTIN4Q96NY8 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
NECTIN4Q96NY8 MIR6722-201ENST00000617286 78 ntBASIC24.67■■□□□ 1.54
NECTIN4Q96NY8 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC24.67■■□□□ 1.54
NECTIN4Q96NY8 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC24.67■■□□□ 1.54
NECTIN4Q96NY8 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
NECTIN4Q96NY8 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
NECTIN4Q96NY8 UNC93B3-201ENST00000308076 687 ntBASIC24.66■■□□□ 1.54
NECTIN4Q96NY8 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
NECTIN4Q96NY8 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC24.66■■□□□ 1.54
NECTIN4Q96NY8 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.66■■□□□ 1.54
NECTIN4Q96NY8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.66■■□□□ 1.54
NECTIN4Q96NY8 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
NECTIN4Q96NY8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.65■■□□□ 1.54
NECTIN4Q96NY8 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
NECTIN4Q96NY8 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC24.65■■□□□ 1.54
NECTIN4Q96NY8 AC026271.2-201ENST00000428091 497 ntBASIC24.65■■□□□ 1.54
NECTIN4Q96NY8 SUDS3P1-201ENST00000505831 966 ntBASIC24.65■■□□□ 1.54
NECTIN4Q96NY8 MIR5787-201ENST00000611784 55 ntBASIC24.65■■□□□ 1.54
NECTIN4Q96NY8 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
NECTIN4Q96NY8 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
NECTIN4Q96NY8 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
NECTIN4Q96NY8 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
NECTIN4Q96NY8 AC135279.3-201ENST00000610945 1311 ntBASIC24.64■■□□□ 1.54
NECTIN4Q96NY8 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
NECTIN4Q96NY8 LGR4-203ENST00000480977 492 ntTSL 2 BASIC24.64■■□□□ 1.54
NECTIN4Q96NY8 AL136162.1-201ENST00000607711 1078 ntBASIC24.64■■□□□ 1.54
NECTIN4Q96NY8 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
NECTIN4Q96NY8 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
NECTIN4Q96NY8 AP004609.3-201ENST00000610705 1884 ntBASIC24.64■■□□□ 1.53
NECTIN4Q96NY8 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.53
NECTIN4Q96NY8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
NECTIN4Q96NY8 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
NECTIN4Q96NY8 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
NECTIN4Q96NY8 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
NECTIN4Q96NY8 AC104564.3-201ENST00000582367 638 ntBASIC24.63■■□□□ 1.53
NECTIN4Q96NY8 AL031432.3-201ENST00000607698 485 ntBASIC24.63■■□□□ 1.53
NECTIN4Q96NY8 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC24.63■■□□□ 1.53
NECTIN4Q96NY8 EDA-201ENST00000338901 1233 ntBASIC24.62■■□□□ 1.53
NECTIN4Q96NY8 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
NECTIN4Q96NY8 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC24.61■■□□□ 1.53
NECTIN4Q96NY8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC24.61■■□□□ 1.53
NECTIN4Q96NY8 SNX5-217ENST00000606557 1087 ntBASIC24.61■■□□□ 1.53
NECTIN4Q96NY8 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC24.61■■□□□ 1.53
NECTIN4Q96NY8 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
NECTIN4Q96NY8 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NECTIN4Q96NY8 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NECTIN4Q96NY8 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC24.6■■□□□ 1.53
NECTIN4Q96NY8 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
NECTIN4Q96NY8 SRD5A1P1-201ENST00000442297 786 ntBASIC24.6■■□□□ 1.53
NECTIN4Q96NY8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.6■■□□□ 1.53
NECTIN4Q96NY8 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC24.6■■□□□ 1.53
NECTIN4Q96NY8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC24.6■■□□□ 1.53
NECTIN4Q96NY8 AL355001.2-201ENST00000620617 1191 ntBASIC24.6■■□□□ 1.53
NECTIN4Q96NY8 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC24.59■■□□□ 1.53
NECTIN4Q96NY8 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
NECTIN4Q96NY8 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
NECTIN4Q96NY8 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
NECTIN4Q96NY8 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
NECTIN4Q96NY8 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
NECTIN4Q96NY8 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC24.58■■□□□ 1.53
NECTIN4Q96NY8 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC24.58■■□□□ 1.53
NECTIN4Q96NY8 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC24.58■■□□□ 1.53
NECTIN4Q96NY8 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
NECTIN4Q96NY8 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
NECTIN4Q96NY8 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms