Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 DRD5P2-201ENST00000421395 2012 ntBASIC28.16■■■□□ 2.1
CDCA5Q96FF9 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CDCA5Q96FF9 AL136162.1-201ENST00000607711 1078 ntBASIC28.15■■■□□ 2.1
CDCA5Q96FF9 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC28.15■■■□□ 2.1
CDCA5Q96FF9 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
CDCA5Q96FF9 LINC01003-201ENST00000564834 1764 ntBASIC28.14■■■□□ 2.1
CDCA5Q96FF9 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC28.14■■■□□ 2.1
CDCA5Q96FF9 MIR5787-201ENST00000611784 55 ntBASIC28.14■■■□□ 2.1
CDCA5Q96FF9 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
CDCA5Q96FF9 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC28.14■■■□□ 2.1
CDCA5Q96FF9 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC28.14■■■□□ 2.1
CDCA5Q96FF9 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC28.14■■■□□ 2.09
CDCA5Q96FF9 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
CDCA5Q96FF9 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
CDCA5Q96FF9 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC28.13■■■□□ 2.09
CDCA5Q96FF9 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CDCA5Q96FF9 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CDCA5Q96FF9 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC28.12■■■□□ 2.09
CDCA5Q96FF9 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC28.12■■■□□ 2.09
CDCA5Q96FF9 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC28.12■■■□□ 2.09
CDCA5Q96FF9 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CDCA5Q96FF9 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC28.11■■■□□ 2.09
CDCA5Q96FF9 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CDCA5Q96FF9 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC28.11■■■□□ 2.09
CDCA5Q96FF9 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC28.11■■■□□ 2.09
CDCA5Q96FF9 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CDCA5Q96FF9 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CDCA5Q96FF9 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CDCA5Q96FF9 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CDCA5Q96FF9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC28.1■■■□□ 2.09
CDCA5Q96FF9 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC28.1■■■□□ 2.09
CDCA5Q96FF9 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
CDCA5Q96FF9 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC28.09■■■□□ 2.09
CDCA5Q96FF9 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
CDCA5Q96FF9 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
CDCA5Q96FF9 SSSCA1-AS1-201ENST00000567594 614 ntBASIC28.09■■■□□ 2.09
CDCA5Q96FF9 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
CDCA5Q96FF9 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
CDCA5Q96FF9 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC28.08■■■□□ 2.09
CDCA5Q96FF9 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC28.07■■■□□ 2.08
CDCA5Q96FF9 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CDCA5Q96FF9 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC28.07■■■□□ 2.08
CDCA5Q96FF9 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CDCA5Q96FF9 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
CDCA5Q96FF9 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC28.06■■■□□ 2.08
CDCA5Q96FF9 HYI-206ENST00000372434 1025 ntTSL 5 BASIC28.06■■■□□ 2.08
CDCA5Q96FF9 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC28.06■■■□□ 2.08
CDCA5Q96FF9 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
CDCA5Q96FF9 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CDCA5Q96FF9 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CDCA5Q96FF9 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CDCA5Q96FF9 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
CDCA5Q96FF9 SNAI3-AS1-204ENST00000567997 2048 ntBASIC28.05■■■□□ 2.08
CDCA5Q96FF9 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC28.04■■■□□ 2.08
CDCA5Q96FF9 EDA-201ENST00000338901 1233 ntBASIC28.04■■■□□ 2.08
CDCA5Q96FF9 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
CDCA5Q96FF9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
CDCA5Q96FF9 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC28.04■■■□□ 2.08
CDCA5Q96FF9 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC28.04■■■□□ 2.08
CDCA5Q96FF9 AC024257.2-201ENST00000549699 147 ntBASIC28.04■■■□□ 2.08
CDCA5Q96FF9 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC28.04■■■□□ 2.08
CDCA5Q96FF9 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC28.04■■■□□ 2.08
CDCA5Q96FF9 SNX5-217ENST00000606557 1087 ntBASIC28.04■■■□□ 2.08
CDCA5Q96FF9 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
CDCA5Q96FF9 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
CDCA5Q96FF9 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CDCA5Q96FF9 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CDCA5Q96FF9 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
CDCA5Q96FF9 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
CDCA5Q96FF9 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC28.03■■■□□ 2.08
CDCA5Q96FF9 AL355001.2-201ENST00000620617 1191 ntBASIC28.03■■■□□ 2.08
CDCA5Q96FF9 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CDCA5Q96FF9 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
CDCA5Q96FF9 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CDCA5Q96FF9 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CDCA5Q96FF9 AC105265.2-201ENST00000467189 838 ntBASIC28.02■■■□□ 2.08
CDCA5Q96FF9 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CDCA5Q96FF9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC28.02■■■□□ 2.08
CDCA5Q96FF9 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CDCA5Q96FF9 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
CDCA5Q96FF9 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CDCA5Q96FF9 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC28.01■■■□□ 2.07
CDCA5Q96FF9 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC28.01■■■□□ 2.07
CDCA5Q96FF9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC28.01■■■□□ 2.07
CDCA5Q96FF9 MIR6722-201ENST00000617286 78 ntBASIC28.01■■■□□ 2.07
CDCA5Q96FF9 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC28.01■■■□□ 2.07
CDCA5Q96FF9 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC28.01■■■□□ 2.07
CDCA5Q96FF9 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
CDCA5Q96FF9 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC28■■■□□ 2.07
CDCA5Q96FF9 AP004609.3-201ENST00000610705 1884 ntBASIC28■■■□□ 2.07
CDCA5Q96FF9 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC28■■■□□ 2.07
CDCA5Q96FF9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC28■■■□□ 2.07
CDCA5Q96FF9 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC27.99■■■□□ 2.07
CDCA5Q96FF9 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC27.99■■■□□ 2.07
CDCA5Q96FF9 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CDCA5Q96FF9 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC27.99■■■□□ 2.07
CDCA5Q96FF9 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC27.98■■■□□ 2.07
CDCA5Q96FF9 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
CDCA5Q96FF9 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
CDCA5Q96FF9 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms