Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC29.38■■■□□ 2.29
CNKSR1Q969H4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
CNKSR1Q969H4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
CNKSR1Q969H4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
CNKSR1Q969H4 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC29.37■■■□□ 2.29
CNKSR1Q969H4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC29.37■■■□□ 2.29
CNKSR1Q969H4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
CNKSR1Q969H4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC29.37■■■□□ 2.29
CNKSR1Q969H4 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC29.37■■■□□ 2.29
CNKSR1Q969H4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CNKSR1Q969H4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC29.37■■■□□ 2.29
CNKSR1Q969H4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC29.35■■■□□ 2.29
CNKSR1Q969H4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC29.35■■■□□ 2.29
CNKSR1Q969H4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
CNKSR1Q969H4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
CNKSR1Q969H4 AP004609.3-201ENST00000610705 1884 ntBASIC29.34■■■□□ 2.29
CNKSR1Q969H4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CNKSR1Q969H4 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC29.34■■■□□ 2.29
CNKSR1Q969H4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC29.34■■■□□ 2.29
CNKSR1Q969H4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC29.34■■■□□ 2.29
CNKSR1Q969H4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CNKSR1Q969H4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CNKSR1Q969H4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
CNKSR1Q969H4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CNKSR1Q969H4 AC026271.2-201ENST00000428091 497 ntBASIC29.33■■■□□ 2.29
CNKSR1Q969H4 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CNKSR1Q969H4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CNKSR1Q969H4 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC29.33■■■□□ 2.29
CNKSR1Q969H4 UNC93B3-201ENST00000308076 687 ntBASIC29.32■■■□□ 2.28
CNKSR1Q969H4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC29.32■■■□□ 2.28
CNKSR1Q969H4 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CNKSR1Q969H4 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CNKSR1Q969H4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CNKSR1Q969H4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC29.31■■■□□ 2.28
CNKSR1Q969H4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC29.31■■■□□ 2.28
CNKSR1Q969H4 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CNKSR1Q969H4 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC29.3■■■□□ 2.28
CNKSR1Q969H4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC29.3■■■□□ 2.28
CNKSR1Q969H4 SUDS3P1-201ENST00000505831 966 ntBASIC29.3■■■□□ 2.28
CNKSR1Q969H4 AL031432.3-201ENST00000607698 485 ntBASIC29.3■■■□□ 2.28
CNKSR1Q969H4 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CNKSR1Q969H4 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC29.3■■■□□ 2.28
CNKSR1Q969H4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC29.29■■■□□ 2.28
CNKSR1Q969H4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC29.29■■■□□ 2.28
CNKSR1Q969H4 MIR6722-201ENST00000617286 78 ntBASIC29.29■■■□□ 2.28
CNKSR1Q969H4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC29.29■■■□□ 2.28
CNKSR1Q969H4 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
CNKSR1Q969H4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC29.29■■■□□ 2.28
CNKSR1Q969H4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CNKSR1Q969H4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC29.28■■■□□ 2.28
CNKSR1Q969H4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC29.28■■■□□ 2.28
CNKSR1Q969H4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC29.28■■■□□ 2.28
CNKSR1Q969H4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC29.28■■■□□ 2.28
CNKSR1Q969H4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC29.28■■■□□ 2.28
CNKSR1Q969H4 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CNKSR1Q969H4 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC29.27■■■□□ 2.28
CNKSR1Q969H4 AC135279.3-201ENST00000610945 1311 ntBASIC29.27■■■□□ 2.28
CNKSR1Q969H4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC29.27■■■□□ 2.28
CNKSR1Q969H4 AL136162.1-201ENST00000607711 1078 ntBASIC29.27■■■□□ 2.28
CNKSR1Q969H4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC29.26■■■□□ 2.28
CNKSR1Q969H4 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CNKSR1Q969H4 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CNKSR1Q969H4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC29.26■■■□□ 2.27
CNKSR1Q969H4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC29.26■■■□□ 2.27
CNKSR1Q969H4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CNKSR1Q969H4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC29.25■■■□□ 2.27
CNKSR1Q969H4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
CNKSR1Q969H4 SNX5-217ENST00000606557 1087 ntBASIC29.25■■■□□ 2.27
CNKSR1Q969H4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC29.24■■■□□ 2.27
CNKSR1Q969H4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC29.24■■■□□ 2.27
CNKSR1Q969H4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC29.24■■■□□ 2.27
CNKSR1Q969H4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC29.24■■■□□ 2.27
CNKSR1Q969H4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC29.24■■■□□ 2.27
CNKSR1Q969H4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC29.24■■■□□ 2.27
CNKSR1Q969H4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CNKSR1Q969H4 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CNKSR1Q969H4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC29.23■■■□□ 2.27
CNKSR1Q969H4 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC29.23■■■□□ 2.27
CNKSR1Q969H4 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CNKSR1Q969H4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CNKSR1Q969H4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CNKSR1Q969H4 MIR5787-201ENST00000611784 55 ntBASIC29.22■■■□□ 2.27
CNKSR1Q969H4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC29.22■■■□□ 2.27
CNKSR1Q969H4 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
CNKSR1Q969H4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
CNKSR1Q969H4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
CNKSR1Q969H4 EDA-201ENST00000338901 1233 ntBASIC29.21■■■□□ 2.27
CNKSR1Q969H4 AC104564.3-201ENST00000582367 638 ntBASIC29.21■■■□□ 2.27
CNKSR1Q969H4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC29.21■■■□□ 2.27
CNKSR1Q969H4 ST7-205ENST00000393446 2114 ntTSL 5 BASIC29.2■■■□□ 2.27
CNKSR1Q969H4 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.27
CNKSR1Q969H4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
CNKSR1Q969H4 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC29.2■■■□□ 2.26
CNKSR1Q969H4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC29.2■■■□□ 2.26
CNKSR1Q969H4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.26
CNKSR1Q969H4 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC29.2■■■□□ 2.26
CNKSR1Q969H4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
CNKSR1Q969H4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
CNKSR1Q969H4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CNKSR1Q969H4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC29.19■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms