Protein–RNA interactions for Protein: Q8WZ73

RFFL, E3 ubiquitin-protein ligase rififylin, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFFLQ8WZ73 AC022413.1-201ENST00000624602 984 ntBASIC25.05■■□□□ 1.6
RFFLQ8WZ73 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.05■■□□□ 1.6
RFFLQ8WZ73 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
RFFLQ8WZ73 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RFFLQ8WZ73 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RFFLQ8WZ73 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.05■■□□□ 1.6
RFFLQ8WZ73 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC25.05■■□□□ 1.6
RFFLQ8WZ73 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
RFFLQ8WZ73 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RFFLQ8WZ73 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
RFFLQ8WZ73 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RFFLQ8WZ73 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RFFLQ8WZ73 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RFFLQ8WZ73 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RFFLQ8WZ73 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RFFLQ8WZ73 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RFFLQ8WZ73 LINC00543-201ENST00000567234 1845 ntBASIC25.03■■□□□ 1.6
RFFLQ8WZ73 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC25.03■■□□□ 1.6
RFFLQ8WZ73 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
RFFLQ8WZ73 AC093536.1-201ENST00000569153 554 ntBASIC25.03■■□□□ 1.6
RFFLQ8WZ73 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RFFLQ8WZ73 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RFFLQ8WZ73 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RFFLQ8WZ73 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
RFFLQ8WZ73 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC25.02■■□□□ 1.6
RFFLQ8WZ73 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.02■■□□□ 1.6
RFFLQ8WZ73 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RFFLQ8WZ73 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RFFLQ8WZ73 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
RFFLQ8WZ73 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
RFFLQ8WZ73 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.01■■□□□ 1.59
RFFLQ8WZ73 MIR6089-201ENST00000616698 64 ntBASIC25.01■■□□□ 1.59
RFFLQ8WZ73 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RFFLQ8WZ73 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC25■■□□□ 1.59
RFFLQ8WZ73 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC25■■□□□ 1.59
RFFLQ8WZ73 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25■■□□□ 1.59
RFFLQ8WZ73 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC25■■□□□ 1.59
RFFLQ8WZ73 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25■■□□□ 1.59
RFFLQ8WZ73 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25■■□□□ 1.59
RFFLQ8WZ73 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC25■■□□□ 1.59
RFFLQ8WZ73 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
RFFLQ8WZ73 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
RFFLQ8WZ73 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
RFFLQ8WZ73 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.99■■□□□ 1.59
RFFLQ8WZ73 NTF6A-201ENST00000591175 560 ntBASIC24.99■■□□□ 1.59
RFFLQ8WZ73 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC24.99■■□□□ 1.59
RFFLQ8WZ73 AC007029.1-201ENST00000604183 313 ntBASIC24.99■■□□□ 1.59
RFFLQ8WZ73 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
RFFLQ8WZ73 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC24.98■■□□□ 1.59
RFFLQ8WZ73 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC24.98■■□□□ 1.59
RFFLQ8WZ73 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC24.98■■□□□ 1.59
RFFLQ8WZ73 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RFFLQ8WZ73 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RFFLQ8WZ73 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RFFLQ8WZ73 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RFFLQ8WZ73 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.98■■□□□ 1.59
RFFLQ8WZ73 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RFFLQ8WZ73 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RFFLQ8WZ73 AC141586.4-201ENST00000624558 1573 ntBASIC24.97■■□□□ 1.59
RFFLQ8WZ73 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
RFFLQ8WZ73 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RFFLQ8WZ73 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RFFLQ8WZ73 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC24.97■■□□□ 1.59
RFFLQ8WZ73 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RFFLQ8WZ73 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
RFFLQ8WZ73 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RFFLQ8WZ73 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RFFLQ8WZ73 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC24.97■■□□□ 1.59
RFFLQ8WZ73 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC24.97■■□□□ 1.59
RFFLQ8WZ73 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RFFLQ8WZ73 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC24.96■■□□□ 1.59
RFFLQ8WZ73 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
RFFLQ8WZ73 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.96■■□□□ 1.59
RFFLQ8WZ73 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC24.96■■□□□ 1.59
RFFLQ8WZ73 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
RFFLQ8WZ73 RARA-203ENST00000394086 2008 ntTSL 2 BASIC24.96■■□□□ 1.59
RFFLQ8WZ73 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.95■■□□□ 1.59
RFFLQ8WZ73 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC24.95■■□□□ 1.59
RFFLQ8WZ73 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24.95■■□□□ 1.58
RFFLQ8WZ73 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RFFLQ8WZ73 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RFFLQ8WZ73 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
RFFLQ8WZ73 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC24.94■■□□□ 1.58
RFFLQ8WZ73 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RFFLQ8WZ73 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RFFLQ8WZ73 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
RFFLQ8WZ73 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC24.94■■□□□ 1.58
RFFLQ8WZ73 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
RFFLQ8WZ73 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC24.94■■□□□ 1.58
RFFLQ8WZ73 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RFFLQ8WZ73 LSR-205ENST00000427250 1606 ntTSL 2 BASIC24.94■■□□□ 1.58
RFFLQ8WZ73 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC24.93■■□□□ 1.58
RFFLQ8WZ73 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
RFFLQ8WZ73 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.93■■□□□ 1.58
RFFLQ8WZ73 RAP2CP1-202ENST00000605179 643 ntBASIC24.93■■□□□ 1.58
RFFLQ8WZ73 AC012354.3-201ENST00000623734 483 ntBASIC24.93■■□□□ 1.58
RFFLQ8WZ73 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RFFLQ8WZ73 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RFFLQ8WZ73 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.92■■□□□ 1.58
RFFLQ8WZ73 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms