Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PGBD3Q8N328 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
PGBD3Q8N328 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
PGBD3Q8N328 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PGBD3Q8N328 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.98■■□□□ 1.43
PGBD3Q8N328 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PGBD3Q8N328 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
PGBD3Q8N328 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
PGBD3Q8N328 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PGBD3Q8N328 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.97■■□□□ 1.43
PGBD3Q8N328 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
PGBD3Q8N328 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PGBD3Q8N328 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
PGBD3Q8N328 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PGBD3Q8N328 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.96■■□□□ 1.43
PGBD3Q8N328 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.96■■□□□ 1.43
PGBD3Q8N328 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.43
PGBD3Q8N328 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
PGBD3Q8N328 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.95■■□□□ 1.42
PGBD3Q8N328 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.95■■□□□ 1.42
PGBD3Q8N328 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PGBD3Q8N328 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PGBD3Q8N328 MIR935-201ENST00000401179 91 ntBASIC23.95■■□□□ 1.42
PGBD3Q8N328 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PGBD3Q8N328 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PGBD3Q8N328 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PGBD3Q8N328 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.94■■□□□ 1.42
PGBD3Q8N328 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PGBD3Q8N328 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
PGBD3Q8N328 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
PGBD3Q8N328 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.94■■□□□ 1.42
PGBD3Q8N328 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PGBD3Q8N328 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.94■■□□□ 1.42
PGBD3Q8N328 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PGBD3Q8N328 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
PGBD3Q8N328 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PGBD3Q8N328 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.93■■□□□ 1.42
PGBD3Q8N328 MTDHP2-201ENST00000601468 714 ntBASIC23.93■■□□□ 1.42
PGBD3Q8N328 AC010997.5-201ENST00000609182 354 ntBASIC23.93■■□□□ 1.42
PGBD3Q8N328 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PGBD3Q8N328 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PGBD3Q8N328 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.93■■□□□ 1.42
PGBD3Q8N328 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
PGBD3Q8N328 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.92■■□□□ 1.42
PGBD3Q8N328 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.92■■□□□ 1.42
PGBD3Q8N328 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.92■■□□□ 1.42
PGBD3Q8N328 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
PGBD3Q8N328 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
PGBD3Q8N328 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.92■■□□□ 1.42
PGBD3Q8N328 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PGBD3Q8N328 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.92■■□□□ 1.42
PGBD3Q8N328 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.91■■□□□ 1.42
PGBD3Q8N328 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PGBD3Q8N328 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.91■■□□□ 1.42
PGBD3Q8N328 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PGBD3Q8N328 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.91■■□□□ 1.42
PGBD3Q8N328 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
PGBD3Q8N328 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.91■■□□□ 1.42
PGBD3Q8N328 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
PGBD3Q8N328 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PGBD3Q8N328 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PGBD3Q8N328 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PGBD3Q8N328 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PGBD3Q8N328 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.9■■□□□ 1.42
PGBD3Q8N328 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PGBD3Q8N328 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PGBD3Q8N328 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.9■■□□□ 1.42
PGBD3Q8N328 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.9■■□□□ 1.42
PGBD3Q8N328 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PGBD3Q8N328 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.9■■□□□ 1.42
PGBD3Q8N328 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PGBD3Q8N328 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.89■■□□□ 1.41
PGBD3Q8N328 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PGBD3Q8N328 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.88■■□□□ 1.41
PGBD3Q8N328 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PGBD3Q8N328 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PGBD3Q8N328 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.88■■□□□ 1.41
PGBD3Q8N328 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.88■■□□□ 1.41
PGBD3Q8N328 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.88■■□□□ 1.41
PGBD3Q8N328 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PGBD3Q8N328 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PGBD3Q8N328 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.87■■□□□ 1.41
PGBD3Q8N328 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PGBD3Q8N328 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.87■■□□□ 1.41
PGBD3Q8N328 AL136116.3-201ENST00000402907 1138 ntBASIC23.87■■□□□ 1.41
PGBD3Q8N328 AC131281.2-201ENST00000520478 145 ntBASIC23.87■■□□□ 1.41
PGBD3Q8N328 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.87■■□□□ 1.41
PGBD3Q8N328 AC011551.1-201ENST00000614101 683 ntBASIC23.87■■□□□ 1.41
PGBD3Q8N328 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PGBD3Q8N328 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
PGBD3Q8N328 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.86■■□□□ 1.41
PGBD3Q8N328 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
PGBD3Q8N328 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.86■■□□□ 1.41
PGBD3Q8N328 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.86■■□□□ 1.41
PGBD3Q8N328 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
PGBD3Q8N328 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PGBD3Q8N328 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.85■■□□□ 1.41
PGBD3Q8N328 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.85■■□□□ 1.41
PGBD3Q8N328 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
PGBD3Q8N328 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms