Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
SLX4Q8IY92 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC29.36■■■□□ 2.29
SLX4Q8IY92 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC29.36■■■□□ 2.29
SLX4Q8IY92 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
SLX4Q8IY92 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC29.36■■■□□ 2.29
SLX4Q8IY92 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC29.36■■■□□ 2.29
SLX4Q8IY92 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC29.36■■■□□ 2.29
SLX4Q8IY92 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
SLX4Q8IY92 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC29.35■■■□□ 2.29
SLX4Q8IY92 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC29.35■■■□□ 2.29
SLX4Q8IY92 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
SLX4Q8IY92 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC29.35■■■□□ 2.29
SLX4Q8IY92 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC29.35■■■□□ 2.29
SLX4Q8IY92 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC29.35■■■□□ 2.29
SLX4Q8IY92 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC29.35■■■□□ 2.29
SLX4Q8IY92 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SLX4Q8IY92 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC29.35■■■□□ 2.29
SLX4Q8IY92 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC29.34■■■□□ 2.29
SLX4Q8IY92 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SLX4Q8IY92 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC29.34■■■□□ 2.29
SLX4Q8IY92 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SLX4Q8IY92 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC29.34■■■□□ 2.29
SLX4Q8IY92 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
SLX4Q8IY92 SNAI3-AS1-204ENST00000567997 2048 ntBASIC29.34■■■□□ 2.29
SLX4Q8IY92 SNX5-217ENST00000606557 1087 ntBASIC29.34■■■□□ 2.29
SLX4Q8IY92 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC29.33■■■□□ 2.29
SLX4Q8IY92 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC29.33■■■□□ 2.29
SLX4Q8IY92 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC29.33■■■□□ 2.29
SLX4Q8IY92 CLTA-206ENST00000466396 695 ntTSL 2 BASIC29.32■■■□□ 2.28
SLX4Q8IY92 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
SLX4Q8IY92 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC29.32■■■□□ 2.28
SLX4Q8IY92 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SLX4Q8IY92 LGR4-203ENST00000480977 492 ntTSL 2 BASIC29.31■■■□□ 2.28
SLX4Q8IY92 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
SLX4Q8IY92 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC29.31■■■□□ 2.28
SLX4Q8IY92 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC29.31■■■□□ 2.28
SLX4Q8IY92 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC29.31■■■□□ 2.28
SLX4Q8IY92 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC29.31■■■□□ 2.28
SLX4Q8IY92 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC29.31■■■□□ 2.28
SLX4Q8IY92 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC29.31■■■□□ 2.28
SLX4Q8IY92 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC29.3■■■□□ 2.28
SLX4Q8IY92 AC135279.3-201ENST00000610945 1311 ntBASIC29.3■■■□□ 2.28
SLX4Q8IY92 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
SLX4Q8IY92 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC29.3■■■□□ 2.28
SLX4Q8IY92 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
SLX4Q8IY92 PBX2P1-201ENST00000493219 1291 ntBASIC29.29■■■□□ 2.28
SLX4Q8IY92 AC142381.2-201ENST00000566120 298 ntBASIC29.29■■■□□ 2.28
SLX4Q8IY92 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
SLX4Q8IY92 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC29.29■■■□□ 2.28
SLX4Q8IY92 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
SLX4Q8IY92 AC092666.2-201ENST00000613287 246 ntBASIC29.28■■■□□ 2.28
SLX4Q8IY92 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SLX4Q8IY92 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC29.28■■■□□ 2.28
SLX4Q8IY92 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC29.28■■■□□ 2.28
SLX4Q8IY92 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC29.27■■■□□ 2.28
SLX4Q8IY92 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC29.27■■■□□ 2.28
SLX4Q8IY92 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC29.27■■■□□ 2.28
SLX4Q8IY92 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
SLX4Q8IY92 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC29.27■■■□□ 2.28
SLX4Q8IY92 AP004609.3-201ENST00000610705 1884 ntBASIC29.27■■■□□ 2.28
SLX4Q8IY92 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
SLX4Q8IY92 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC29.27■■■□□ 2.28
SLX4Q8IY92 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
SLX4Q8IY92 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
SLX4Q8IY92 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC29.26■■■□□ 2.27
SLX4Q8IY92 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC29.25■■■□□ 2.27
SLX4Q8IY92 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
SLX4Q8IY92 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC29.25■■■□□ 2.27
SLX4Q8IY92 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
SLX4Q8IY92 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
SLX4Q8IY92 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC29.25■■■□□ 2.27
SLX4Q8IY92 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC29.24■■■□□ 2.27
SLX4Q8IY92 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC29.24■■■□□ 2.27
SLX4Q8IY92 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC29.24■■■□□ 2.27
SLX4Q8IY92 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC29.23■■■□□ 2.27
SLX4Q8IY92 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
SLX4Q8IY92 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC29.23■■■□□ 2.27
SLX4Q8IY92 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC29.23■■■□□ 2.27
SLX4Q8IY92 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
SLX4Q8IY92 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
SLX4Q8IY92 AC104564.3-201ENST00000582367 638 ntBASIC29.22■■■□□ 2.27
SLX4Q8IY92 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC29.22■■■□□ 2.27
SLX4Q8IY92 UNC93B3-201ENST00000308076 687 ntBASIC29.22■■■□□ 2.27
SLX4Q8IY92 AC139426.1-201ENST00000568218 2529 ntBASIC29.21■■■□□ 2.27
SLX4Q8IY92 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC29.21■■■□□ 2.27
SLX4Q8IY92 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC29.21■■■□□ 2.27
SLX4Q8IY92 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
SLX4Q8IY92 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC29.2■■■□□ 2.27
SLX4Q8IY92 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC29.2■■■□□ 2.26
SLX4Q8IY92 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
SLX4Q8IY92 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
SLX4Q8IY92 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC29.2■■■□□ 2.26
SLX4Q8IY92 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC29.2■■■□□ 2.26
SLX4Q8IY92 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
SLX4Q8IY92 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
SLX4Q8IY92 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
SLX4Q8IY92 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
SLX4Q8IY92 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
SLX4Q8IY92 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC29.18■■■□□ 2.26
SLX4Q8IY92 SSSCA1-AS1-201ENST00000567594 614 ntBASIC29.18■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms