Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VPS13CQ709C8 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.99■□□□□ 0.79
VPS13CQ709C8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VPS13CQ709C8 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VPS13CQ709C8 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
VPS13CQ709C8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.98■□□□□ 0.79
VPS13CQ709C8 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.98■□□□□ 0.79
VPS13CQ709C8 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VPS13CQ709C8 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
VPS13CQ709C8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
VPS13CQ709C8 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.98■□□□□ 0.79
VPS13CQ709C8 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VPS13CQ709C8 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.98■□□□□ 0.79
VPS13CQ709C8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VPS13CQ709C8 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.97■□□□□ 0.79
VPS13CQ709C8 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
VPS13CQ709C8 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.97■□□□□ 0.79
VPS13CQ709C8 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
VPS13CQ709C8 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
VPS13CQ709C8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.97■□□□□ 0.79
VPS13CQ709C8 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VPS13CQ709C8 AC090192.1-201ENST00000517740 490 ntBASIC19.96■□□□□ 0.79
VPS13CQ709C8 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.96■□□□□ 0.79
VPS13CQ709C8 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.96■□□□□ 0.79
VPS13CQ709C8 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.96■□□□□ 0.79
VPS13CQ709C8 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
VPS13CQ709C8 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VPS13CQ709C8 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
VPS13CQ709C8 AC097381.1-201ENST00000429019 1296 ntBASIC19.96■□□□□ 0.79
VPS13CQ709C8 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.96■□□□□ 0.79
VPS13CQ709C8 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.96■□□□□ 0.79
VPS13CQ709C8 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS13CQ709C8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.95■□□□□ 0.78
VPS13CQ709C8 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS13CQ709C8 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS13CQ709C8 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VPS13CQ709C8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.95■□□□□ 0.78
VPS13CQ709C8 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
VPS13CQ709C8 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
VPS13CQ709C8 AC142381.2-201ENST00000566120 298 ntBASIC19.95■□□□□ 0.78
VPS13CQ709C8 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.95■□□□□ 0.78
VPS13CQ709C8 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
VPS13CQ709C8 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VPS13CQ709C8 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS13CQ709C8 AL162430.1-201ENST00000480705 870 ntBASIC19.94■□□□□ 0.78
VPS13CQ709C8 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VPS13CQ709C8 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS13CQ709C8 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS13CQ709C8 UNC93B3-201ENST00000308076 687 ntBASIC19.94■□□□□ 0.78
VPS13CQ709C8 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
VPS13CQ709C8 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VPS13CQ709C8 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS13CQ709C8 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS13CQ709C8 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS13CQ709C8 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.93■□□□□ 0.78
VPS13CQ709C8 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VPS13CQ709C8 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
VPS13CQ709C8 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.93■□□□□ 0.78
VPS13CQ709C8 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.93■□□□□ 0.78
VPS13CQ709C8 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.93■□□□□ 0.78
VPS13CQ709C8 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VPS13CQ709C8 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.92■□□□□ 0.78
VPS13CQ709C8 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS13CQ709C8 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS13CQ709C8 MTDHP2-201ENST00000601468 714 ntBASIC19.92■□□□□ 0.78
VPS13CQ709C8 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS13CQ709C8 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.92■□□□□ 0.78
VPS13CQ709C8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.92■□□□□ 0.78
VPS13CQ709C8 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VPS13CQ709C8 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS13CQ709C8 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.91■□□□□ 0.78
VPS13CQ709C8 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS13CQ709C8 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.91■□□□□ 0.78
VPS13CQ709C8 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.91■□□□□ 0.78
VPS13CQ709C8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.91■□□□□ 0.78
VPS13CQ709C8 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS13CQ709C8 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS13CQ709C8 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.9■□□□□ 0.78
VPS13CQ709C8 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS13CQ709C8 AC024257.2-201ENST00000549699 147 ntBASIC19.9■□□□□ 0.78
VPS13CQ709C8 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.9■□□□□ 0.78
VPS13CQ709C8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS13CQ709C8 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.89■□□□□ 0.78
VPS13CQ709C8 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
VPS13CQ709C8 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.89■□□□□ 0.77
VPS13CQ709C8 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.89■□□□□ 0.77
VPS13CQ709C8 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.89■□□□□ 0.77
VPS13CQ709C8 AC087623.3-201ENST00000607047 1098 ntBASIC19.89■□□□□ 0.77
VPS13CQ709C8 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VPS13CQ709C8 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.89■□□□□ 0.77
VPS13CQ709C8 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VPS13CQ709C8 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.89■□□□□ 0.77
VPS13CQ709C8 PBX2P1-201ENST00000493219 1291 ntBASIC19.89■□□□□ 0.77
VPS13CQ709C8 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.89■□□□□ 0.77
VPS13CQ709C8 SHF-206ENST00000560471 2499 ntTSL 5 BASIC19.89■□□□□ 0.77
VPS13CQ709C8 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.88■□□□□ 0.77
VPS13CQ709C8 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VPS13CQ709C8 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VPS13CQ709C8 AL356740.2-201ENST00000601559 647 ntBASIC19.88■□□□□ 0.77
VPS13CQ709C8 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 8.1 ms