Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV21A0A0B4J279 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV21A0A0B4J279 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV21A0A0B4J279 LINC00543-201ENST00000567234 1845 ntBASIC17.47■□□□□ 0.39
TRAV21A0A0B4J279 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TRAV21A0A0B4J279 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
TRAV21A0A0B4J279 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV21A0A0B4J279 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
TRAV21A0A0B4J279 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV21A0A0B4J279 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
TRAV21A0A0B4J279 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV21A0A0B4J279 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV21A0A0B4J279 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV21A0A0B4J279 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC17.46■□□□□ 0.39
TRAV21A0A0B4J279 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC17.46■□□□□ 0.39
TRAV21A0A0B4J279 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TRAV21A0A0B4J279 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC17.46■□□□□ 0.39
TRAV21A0A0B4J279 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV21A0A0B4J279 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV21A0A0B4J279 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAV21A0A0B4J279 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV21A0A0B4J279 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV21A0A0B4J279 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
TRAV21A0A0B4J279 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC17.45■□□□□ 0.38
TRAV21A0A0B4J279 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV21A0A0B4J279 SMPD5-203ENST00000639008 1464 ntBASIC17.45■□□□□ 0.38
TRAV21A0A0B4J279 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
TRAV21A0A0B4J279 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV21A0A0B4J279 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV21A0A0B4J279 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV21A0A0B4J279 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC17.45■□□□□ 0.38
TRAV21A0A0B4J279 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV21A0A0B4J279 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV21A0A0B4J279 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV21A0A0B4J279 REST-210ENST00000638187 1334 ntTSL 5 BASIC17.45■□□□□ 0.38
TRAV21A0A0B4J279 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV21A0A0B4J279 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC17.44■□□□□ 0.38
TRAV21A0A0B4J279 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC17.44■□□□□ 0.38
TRAV21A0A0B4J279 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TRAV21A0A0B4J279 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC17.44■□□□□ 0.38
TRAV21A0A0B4J279 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TRAV21A0A0B4J279 AC060814.1-201ENST00000554326 538 ntBASIC17.44■□□□□ 0.38
TRAV21A0A0B4J279 MOB2-207ENST00000614710 705 ntTSL 5 BASIC17.44■□□□□ 0.38
TRAV21A0A0B4J279 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC17.44■□□□□ 0.38
TRAV21A0A0B4J279 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TRAV21A0A0B4J279 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV21A0A0B4J279 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV21A0A0B4J279 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV21A0A0B4J279 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC17.44■□□□□ 0.38
TRAV21A0A0B4J279 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV21A0A0B4J279 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRAV21A0A0B4J279 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV21A0A0B4J279 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TRAV21A0A0B4J279 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRAV21A0A0B4J279 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV21A0A0B4J279 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV21A0A0B4J279 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV21A0A0B4J279 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV21A0A0B4J279 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV21A0A0B4J279 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV21A0A0B4J279 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV21A0A0B4J279 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV21A0A0B4J279 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV21A0A0B4J279 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV21A0A0B4J279 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV21A0A0B4J279 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV21A0A0B4J279 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC17.43■□□□□ 0.38
TRAV21A0A0B4J279 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV21A0A0B4J279 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV21A0A0B4J279 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAV21A0A0B4J279 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV21A0A0B4J279 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC17.42■□□□□ 0.38
TRAV21A0A0B4J279 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV21A0A0B4J279 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV21A0A0B4J279 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV21A0A0B4J279 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV21A0A0B4J279 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV21A0A0B4J279 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV21A0A0B4J279 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV21A0A0B4J279 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV21A0A0B4J279 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV21A0A0B4J279 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TRAV21A0A0B4J279 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV21A0A0B4J279 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC17.41■□□□□ 0.38
TRAV21A0A0B4J279 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV21A0A0B4J279 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV21A0A0B4J279 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV21A0A0B4J279 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV21A0A0B4J279 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV21A0A0B4J279 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV21A0A0B4J279 TPT1-202ENST00000379055 948 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV21A0A0B4J279 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV21A0A0B4J279 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV21A0A0B4J279 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV21A0A0B4J279 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAV21A0A0B4J279 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV21A0A0B4J279 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV21A0A0B4J279 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC17.39■□□□□ 0.38
TRAV21A0A0B4J279 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAV21A0A0B4J279 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms