Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
IGKV2-28A0A075B6P5 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC15.52■□□□□ 0.07
IGKV2-28A0A075B6P5 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
IGKV2-28A0A075B6P5 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
IGKV2-28A0A075B6P5 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
IGKV2-28A0A075B6P5 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
IGKV2-28A0A075B6P5 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
IGKV2-28A0A075B6P5 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IGKV2-28A0A075B6P5 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
IGKV2-28A0A075B6P5 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IGKV2-28A0A075B6P5 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
IGKV2-28A0A075B6P5 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IGKV2-28A0A075B6P5 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IGKV2-28A0A075B6P5 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
IGKV2-28A0A075B6P5 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
IGKV2-28A0A075B6P5 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IGKV2-28A0A075B6P5 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
IGKV2-28A0A075B6P5 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
IGKV2-28A0A075B6P5 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
IGKV2-28A0A075B6P5 SLC6A10P-202ENST00000431994 2058 ntBASIC15.5■□□□□ 0.07
IGKV2-28A0A075B6P5 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IGKV2-28A0A075B6P5 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
IGKV2-28A0A075B6P5 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC15.5■□□□□ 0.07
IGKV2-28A0A075B6P5 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC15.5■□□□□ 0.07
IGKV2-28A0A075B6P5 CHML-204ENST00000638121 920 ntTSL 2 BASIC15.5■□□□□ 0.07
IGKV2-28A0A075B6P5 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
IGKV2-28A0A075B6P5 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
IGKV2-28A0A075B6P5 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IGKV2-28A0A075B6P5 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IGKV2-28A0A075B6P5 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
IGKV2-28A0A075B6P5 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IGKV2-28A0A075B6P5 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGKV2-28A0A075B6P5 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGKV2-28A0A075B6P5 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC15.49■□□□□ 0.07
IGKV2-28A0A075B6P5 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGKV2-28A0A075B6P5 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGKV2-28A0A075B6P5 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGKV2-28A0A075B6P5 RPS2P35-201ENST00000443417 897 ntBASIC15.49■□□□□ 0.07
IGKV2-28A0A075B6P5 CHST11-202ENST00000546689 756 ntTSL 2 BASIC15.49■□□□□ 0.07
IGKV2-28A0A075B6P5 HGH1-207ENST00000628266 258 ntTSL 5 BASIC15.49■□□□□ 0.07
IGKV2-28A0A075B6P5 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGKV2-28A0A075B6P5 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGKV2-28A0A075B6P5 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
IGKV2-28A0A075B6P5 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
IGKV2-28A0A075B6P5 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
IGKV2-28A0A075B6P5 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IGKV2-28A0A075B6P5 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC15.48■□□□□ 0.07
IGKV2-28A0A075B6P5 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IGKV2-28A0A075B6P5 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
IGKV2-28A0A075B6P5 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
IGKV2-28A0A075B6P5 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
IGKV2-28A0A075B6P5 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
IGKV2-28A0A075B6P5 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC15.48■□□□□ 0.07
IGKV2-28A0A075B6P5 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC15.47■□□□□ 0.07
IGKV2-28A0A075B6P5 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IGKV2-28A0A075B6P5 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
IGKV2-28A0A075B6P5 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IGKV2-28A0A075B6P5 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC15.47■□□□□ 0.07
IGKV2-28A0A075B6P5 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
IGKV2-28A0A075B6P5 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
IGKV2-28A0A075B6P5 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
IGKV2-28A0A075B6P5 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
IGKV2-28A0A075B6P5 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IGKV2-28A0A075B6P5 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC15.47■□□□□ 0.07
IGKV2-28A0A075B6P5 LINC01971-201ENST00000617888 1048 ntBASIC15.47■□□□□ 0.07
IGKV2-28A0A075B6P5 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IGKV2-28A0A075B6P5 C9orf163-202ENST00000624034 2573 ntBASIC15.47■□□□□ 0.07
IGKV2-28A0A075B6P5 AC004812.2-201ENST00000611079 2094 ntBASIC15.47■□□□□ 0.07
IGKV2-28A0A075B6P5 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
IGKV2-28A0A075B6P5 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
IGKV2-28A0A075B6P5 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
IGKV2-28A0A075B6P5 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
IGKV2-28A0A075B6P5 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
IGKV2-28A0A075B6P5 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
IGKV2-28A0A075B6P5 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
IGKV2-28A0A075B6P5 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
IGKV2-28A0A075B6P5 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
IGKV2-28A0A075B6P5 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
IGKV2-28A0A075B6P5 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
IGKV2-28A0A075B6P5 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
IGKV2-28A0A075B6P5 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
IGKV2-28A0A075B6P5 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
IGKV2-28A0A075B6P5 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
IGKV2-28A0A075B6P5 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
IGKV2-28A0A075B6P5 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC15.45■□□□□ 0.06
IGKV2-28A0A075B6P5 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
IGKV2-28A0A075B6P5 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
IGKV2-28A0A075B6P5 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
IGKV2-28A0A075B6P5 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
IGKV2-28A0A075B6P5 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC15.45■□□□□ 0.06
IGKV2-28A0A075B6P5 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
IGKV2-28A0A075B6P5 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
IGKV2-28A0A075B6P5 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
IGKV2-28A0A075B6P5 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
IGKV2-28A0A075B6P5 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC15.45■□□□□ 0.06
IGKV2-28A0A075B6P5 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
IGKV2-28A0A075B6P5 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
IGKV2-28A0A075B6P5 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
IGKV2-28A0A075B6P5 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
IGKV2-28A0A075B6P5 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms