Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.19□□□□□ -0.46
NUP35Q8NFH5 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.18□□□□□ -0.46
NUP35Q8NFH5 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 MME-217ENST00000616757 1315 ntTSL 5 BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 CTNS-203ENST00000399306 803 ntTSL 3 BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 LINC00982-205ENST00000420957 435 ntBASIC12.18□□□□□ -0.46
NUP35Q8NFH5 AL020989.1-201ENST00000422979 469 ntBASIC12.18□□□□□ -0.46
NUP35Q8NFH5 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 AC009533.2-201ENST00000543664 586 ntBASIC12.18□□□□□ -0.46
NUP35Q8NFH5 AL355075.4-201ENST00000554988 638 ntBASIC12.18□□□□□ -0.46
NUP35Q8NFH5 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 AC004817.3-201ENST00000602957 2129 ntBASIC12.18□□□□□ -0.46
NUP35Q8NFH5 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NUP35Q8NFH5 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NUP35Q8NFH5 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NUP35Q8NFH5 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NUP35Q8NFH5 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NUP35Q8NFH5 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NUP35Q8NFH5 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
NUP35Q8NFH5 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
NUP35Q8NFH5 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
NUP35Q8NFH5 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.17□□□□□ -0.46
NUP35Q8NFH5 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
NUP35Q8NFH5 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
NUP35Q8NFH5 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NUP35Q8NFH5 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NUP35Q8NFH5 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.17□□□□□ -0.46
NUP35Q8NFH5 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
NUP35Q8NFH5 ANKRD20A18P-201ENST00000359341 492 ntBASIC12.17□□□□□ -0.46
NUP35Q8NFH5 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC12.17□□□□□ -0.46
NUP35Q8NFH5 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC12.17□□□□□ -0.46
NUP35Q8NFH5 DANCR-204ENST00000444958 709 ntTSL 3 BASIC12.17□□□□□ -0.46
NUP35Q8NFH5 RN7SL606P-201ENST00000472779 293 ntBASIC12.17□□□□□ -0.46
NUP35Q8NFH5 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC12.17□□□□□ -0.46
NUP35Q8NFH5 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC12.17□□□□□ -0.46
NUP35Q8NFH5 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC12.17□□□□□ -0.46
NUP35Q8NFH5 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NUP35Q8NFH5 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC12.17□□□□□ -0.46
NUP35Q8NFH5 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC12.17□□□□□ -0.46
NUP35Q8NFH5 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
NUP35Q8NFH5 SNX21-213ENST00000614929 587 ntTSL 5 BASIC12.17□□□□□ -0.46
NUP35Q8NFH5 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC12.17□□□□□ -0.46
NUP35Q8NFH5 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NUP35Q8NFH5 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NUP35Q8NFH5 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms