Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
FOXR1Q6PIV2 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXR1Q6PIV2 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXR1Q6PIV2 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17.01■□□□□ 0.31
FOXR1Q6PIV2 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
FOXR1Q6PIV2 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.01■□□□□ 0.31
FOXR1Q6PIV2 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXR1Q6PIV2 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
FOXR1Q6PIV2 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXR1Q6PIV2 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
FOXR1Q6PIV2 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.01■□□□□ 0.31
FOXR1Q6PIV2 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
FOXR1Q6PIV2 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
FOXR1Q6PIV2 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXR1Q6PIV2 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
FOXR1Q6PIV2 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXR1Q6PIV2 LINC00528-201ENST00000600723 2160 ntBASIC17.01■□□□□ 0.31
FOXR1Q6PIV2 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.01■□□□□ 0.31
FOXR1Q6PIV2 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
FOXR1Q6PIV2 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXR1Q6PIV2 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
FOXR1Q6PIV2 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17■□□□□ 0.31
FOXR1Q6PIV2 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17■□□□□ 0.31
FOXR1Q6PIV2 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17■□□□□ 0.31
FOXR1Q6PIV2 AC004817.3-201ENST00000602957 2129 ntBASIC17■□□□□ 0.31
FOXR1Q6PIV2 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXR1Q6PIV2 AC097374.2-201ENST00000618617 1306 ntBASIC17■□□□□ 0.31
FOXR1Q6PIV2 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
FOXR1Q6PIV2 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17■□□□□ 0.31
FOXR1Q6PIV2 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17■□□□□ 0.31
FOXR1Q6PIV2 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17■□□□□ 0.31
FOXR1Q6PIV2 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXR1Q6PIV2 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
FOXR1Q6PIV2 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXR1Q6PIV2 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
FOXR1Q6PIV2 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
FOXR1Q6PIV2 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
FOXR1Q6PIV2 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
FOXR1Q6PIV2 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXR1Q6PIV2 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXR1Q6PIV2 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17■□□□□ 0.31
FOXR1Q6PIV2 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17■□□□□ 0.31
FOXR1Q6PIV2 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
FOXR1Q6PIV2 AC004967.1-201ENST00000453589 447 ntBASIC17■□□□□ 0.31
FOXR1Q6PIV2 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17■□□□□ 0.31
FOXR1Q6PIV2 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17■□□□□ 0.31
FOXR1Q6PIV2 AP001160.2-201ENST00000596071 487 ntBASIC17■□□□□ 0.31
FOXR1Q6PIV2 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
FOXR1Q6PIV2 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17■□□□□ 0.31
FOXR1Q6PIV2 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17■□□□□ 0.31
FOXR1Q6PIV2 UCKL1-AS1-201ENST00000623569 3602 ntBASIC17■□□□□ 0.31
FOXR1Q6PIV2 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17■□□□□ 0.31
FOXR1Q6PIV2 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
FOXR1Q6PIV2 BX276092.7-203ENST00000637198 1536 ntBASIC17■□□□□ 0.31
FOXR1Q6PIV2 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
FOXR1Q6PIV2 AC136621.1-201ENST00000624017 2304 ntBASIC16.99■□□□□ 0.31
FOXR1Q6PIV2 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
FOXR1Q6PIV2 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.99■□□□□ 0.31
FOXR1Q6PIV2 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXR1Q6PIV2 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.99■□□□□ 0.31
FOXR1Q6PIV2 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
FOXR1Q6PIV2 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXR1Q6PIV2 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXR1Q6PIV2 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXR1Q6PIV2 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC16.99■□□□□ 0.31
FOXR1Q6PIV2 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
FOXR1Q6PIV2 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
FOXR1Q6PIV2 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC16.99■□□□□ 0.31
FOXR1Q6PIV2 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
FOXR1Q6PIV2 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXR1Q6PIV2 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXR1Q6PIV2 AC007967.3-201ENST00000434308 558 ntBASIC16.99■□□□□ 0.31
FOXR1Q6PIV2 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
FOXR1Q6PIV2 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.99■□□□□ 0.31
FOXR1Q6PIV2 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.99■□□□□ 0.31
FOXR1Q6PIV2 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.99■□□□□ 0.31
FOXR1Q6PIV2 AC134684.3-201ENST00000641758 218 ntBASIC16.99■□□□□ 0.31
FOXR1Q6PIV2 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
FOXR1Q6PIV2 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
FOXR1Q6PIV2 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXR1Q6PIV2 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC16.99■□□□□ 0.31
FOXR1Q6PIV2 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXR1Q6PIV2 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
FOXR1Q6PIV2 AL137784.3-201ENST00000623858 2288 ntBASIC16.99■□□□□ 0.31
FOXR1Q6PIV2 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
FOXR1Q6PIV2 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXR1Q6PIV2 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
FOXR1Q6PIV2 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXR1Q6PIV2 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.99■□□□□ 0.31
FOXR1Q6PIV2 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
FOXR1Q6PIV2 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXR1Q6PIV2 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms